RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 MAGEA6P43360 314 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 TFDP2Q14188 446 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 MFSD10Q14728 455 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.043e-6■■□□□ 11.6
PRPF38B-204ENST00000467302 TSNAXIP1Q2TAA8 658 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 RAB6CQ53S08 254 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 SYCP2LQ5T4T6 812 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 NT5DC4Q86YG4 428 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 LMNTD2Q8IXW0 634 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 TMEM130Q8N3G9 435 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 FAM136AQ96C01 138 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 TMEM176AQ96HP8 235 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 RNF157Q96PX1 679 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 FRMD8Q9BZ67 464 aaPredicted RBP15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 NMUR2Q9GZQ4 415 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 RAB6CQ9H0N0 254 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 POPDC2Q9HBU9 364 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 RAB6BQ9NRW1 208 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 GINS2Q9Y248 185 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 PLLPQ9Y342 182 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 Q9Y3F1 56 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 CITO14578 2027 aa15.27■□□□□ 0.04
PRPF38B-204ENST00000467302 C2CD4BA6NLJ0 364 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 CXorf49A8MYA2 514 aaPredicted RBP15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 ESRRAP11474 423 aaPredicted RBP15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 P4HA1P13674 534 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 IL4RP24394 825 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 VHLP40337 213 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 CCNFP41002 786 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 GRM5P41594 1212 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 MRPS35P82673 323 aaKnown RBP15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 MRPS5P82675 430 aaKnown RBP15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 TMEM62Q0P6H9 643 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 SREBF2Q12772 1141 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 RCN1Q15293 331 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 CAND1Q86VP6 1230 aaKnown RBP15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 PLD5Q8N7P1 536 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 NRG4Q8WWG1 115 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 C7orf26Q96N11 449 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 AP5M1Q9H0R1 490 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 MKS1Q9NXB0 559 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 KCNK4Q9NYG8 393 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 C2CD2Q9Y426 696 aa15.27■□□□□ 0.03
PRPF38B-204ENST00000467302 CAPN14A8MX76 684 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 H7C0C1 242 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 M0QYV0 167 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 TNPO2O14787 897 aaKnown RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 NVLO15381 856 aaKnown RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 GPR32O75388 356 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 KRT36O76013 467 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 SNRPAP09012 282 aaKnown RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 NEFHP12036 1026 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CYP2B6P20813 491 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 GPD1P21695 349 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 ATP5OP48047 213 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 PSEN2P49810 448 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CCNHP51946 323 aaPredicted RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 OCRLQ01968 901 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CCL14Q16627 93 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CES4AQ5XG92 561 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 VPS52Q8N1B4 723 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 WDR60Q8WVS4 1066 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 APBB2Q92870 758 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CFAP36Q96G28 342 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 HPDLQ96IR7 371 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CYP3A43Q9HB55 503 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 DPP3Q9NY33 737 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 SIRPGQ9P1W8 387 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 ITGA11Q9UKX5 1188 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 DPPA5A6NC42 116 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 HAS3O00219 553 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 RFPL1O75677 317 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 KRT37O76014 449 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CYP2C9P11712 490 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 RBP5P82980 135 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 FAM182AQ5T1J6 154 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 C1orf228Q6PIY5 440 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 CATSPER4Q7RTX7 472 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 ALYREFQ86V81 257 aaKnown RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 PPM1NQ8N819 430 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 RXFP2Q8WXD0 754 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 MCUR1Q96AQ8 359 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 LENG1Q96BZ8 264 aaPredicted RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 KATNAL1Q9BW62 490 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 ARMCX1Q9P291 453 aa15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 ZC3H7BQ9UGR2 993 aaKnown RBP15.26■□□□□ 0.03
PRPF38B-204ENST00000467302 EIF4E1BA6NMX2 242 aaKnown RBP15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 KCNN4O15554 427 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 TBX10O75333 385 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 PSMG1O95456 288 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 NPTXRO95502 500 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 IGHA2P01877 340 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 VDRP11473 427 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 PDGFRAP16234 1089 aa15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
PRPF38B-204ENST00000467302 RAP1GDS1P52306 607 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms