RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZSCAN9O15535 394 aaPredicted RBP4.92□□□□□ -1.62
SMC4-207ENST00000467263 PRAMEF2O60811 474 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 USP1O94782 785 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 IDEP14735 1019 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 EGR1P18146 543 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 DRD1P21728 446 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 NR4A2P43354 598 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 GPC5P78333 572 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 TXNL4AP83876 142 aaKnown RBP4.92□□□□□ -1.62
SMC4-207ENST00000467263 MFSD13AQ14CX5 517 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 ACOX1Q15067 660 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 RABEP1Q15276 862 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 GPR162Q16538 588 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.92□□□□□ -1.62
SMC4-207ENST00000467263 SYCP2LQ5T4T6 812 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 FBXO38Q6PIJ6 1188 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 USP17L6PQ6QN14 398 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 DCDC5Q6ZRR9 648 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 SKAP1Q86WV1 359 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 CNGA4Q8IV77 575 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 LINC01465Q8N7H1 131 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 C12orf76Q8N812 135 aaPredicted RBP4.92□□□□□ -1.62
SMC4-207ENST00000467263 FAM71DQ8N9W8 422 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 C8orf58Q8NAV2 365 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 GRAMD1AQ96CP6 724 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 GDF15Q99988 308 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 EFHD1Q9BUP0 239 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 VPS16Q9H269 839 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 SAP30LQ9HAJ7 183 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 MTMR4Q9NYA4 1195 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 RGL1Q9NZL6 768 aa4.92□□□□□ -1.62
SMC4-207ENST00000467263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 BTBD19C9JJ37 291 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 PODXLO00592 558 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 FYB1O15117 783 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 PLIN1O60240 522 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 CBFA2T3O75081 653 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 CHRM5P08912 532 aaPredicted RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 ABCB4P21439 1286 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 HSPA7P48741 367 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 CCT4P50991 539 aaKnown RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 CFHR3Q02985 330 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 KCNB1Q14721 858 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 LARS2Q15031 903 aaKnown RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 MPEG1Q2M385 716 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 AASDHQ4L235 1098 aaPredicted RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 KLHL22Q53GT1 634 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 RUSC1-AS1Q66K80 236 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 MIS18BP1Q6P0N0 1132 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 ZNF517Q6ZMY9 492 aaPredicted RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 NOL8Q76FK4 1167 aaKnown RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 FAM186BQ8IYM0 893 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 C18orf8Q96DM3 657 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 EDC3Q96F86 508 aaKnown RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 SGCZQ96LD1 299 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 WDR24Q96S15 920 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 EIF2AQ9BY44 585 aaKnown RBP4.91□□□□□ -1.62
SMC4-207ENST00000467263 PRSS22Q9GZN4 317 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 VPS45Q9NRW7 570 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 KLHL13Q9P2N7 655 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 VPS4AQ9UN37 437 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 PCDHB2Q9Y5E7 798 aa4.91□□□□□ -1.62
SMC4-207ENST00000467263 TMEM232C9JQI7 657 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 IFIT2P09913 472 aaKnown RBP4.9□□□□□ -1.63
SMC4-207ENST00000467263 SRGAP2BP0DMP2 458 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 ATF7P17544 494 aaPredicted RBP4.9□□□□□ -1.63
SMC4-207ENST00000467263 SLC5A2P31639 672 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 GALNSP34059 522 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 CCDC15Q0P6D6 951 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 BFSP2Q13515 415 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 DAZAP2Q15038 168 aaPredicted RBP4.9□□□□□ -1.63
SMC4-207ENST00000467263 SLC5A9Q2M3M2 681 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 ZNF260Q3ZCT1 412 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 TMEM196Q5HYL7 178 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 TMTC4Q5T4D3 741 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 XRRA1Q6P2D8 792 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 DEPTORQ8TB45 409 aa4.9□□□□□ -1.63
SMC4-207ENST00000467263 ELAC2Q9BQ52 826 aaKnown RBP4.9□□□□□ -1.63
SMC4-207ENST00000467263 CINPQ9BW66 212 aaPredicted RBP4.9□□□□□ -1.63
SMC4-207ENST00000467263 H3BNC9 293 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 VIPP01282 170 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 MBPP02686 304 aaPredicted RBP4.89□□□□□ -1.63
SMC4-207ENST00000467263 TMIGD3P0DMS9 266 aaPredicted RBP4.89□□□□□ -1.63
SMC4-207ENST00000467263 RAE1P78406 368 aaKnown RBP4.89□□□□□ -1.63
SMC4-207ENST00000467263 SLC14A1Q13336 389 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 DNASE1L3Q13609 305 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 KCNJ12Q14500 433 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 MAPKAPK3Q16644 382 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 P3H1Q32P28 736 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 Q4G0T1 1027 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 CC2D1BQ5T0F9 858 aaKnown RBP4.89□□□□□ -1.63
SMC4-207ENST00000467263 RANBP10Q6VN20 620 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 KRT73Q86Y46 540 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 GALNT16Q8N428 558 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMC4-207ENST00000467263 ACRBPQ8NEB7 543 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 GJA10Q969M2 543 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 KAZALD1Q96I82 304 aa4.89□□□□□ -1.63
SMC4-207ENST00000467263 PCGF6Q9BYE7 350 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms