RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 UQCRC1P31930 480 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 JAK3P52333 1124 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 TIRAPP58753 221 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 MTA1Q13330 715 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 SF3B4Q15427 424 aaKnown RBP eCLIP4.51□□□□□ -1.69
XRN1-206ENST00000467077 PRAMEF19Q5SWL8 479 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 USP45Q70EL2 814 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 TRILQ7L0X0 811 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 CDK5RAP3Q96JB5 506 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 ZNF556Q9HAH1 456 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 THSD1Q9NS62 852 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 CPA4Q9UI42 421 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 AGO2Q9UKV8 859 aaKnown RBP4.51□□□□□ -1.69
XRN1-206ENST00000467077 FZD4Q9ULV1 537 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 A0A0B4J293 547 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 DENND3A2RUS2 1198 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 EXOC5O00471 708 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 RGS10O43665 173 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 DDNO94850 711 aaPredicted RBP4.5□□□□□ -1.69
XRN1-206ENST00000467077 UMODP07911 640 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 TFEBP19484 476 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 IBSPP21815 317 aaPredicted RBP4.5□□□□□ -1.69
XRN1-206ENST00000467077 HOXA7P31268 230 aaPredicted RBP4.5□□□□□ -1.69
XRN1-206ENST00000467077 ERVFC1-1P60608 527 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 PGS1Q32NB8 556 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 CACHD1Q5VU97 1274 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 SKAP1Q86WV1 359 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 MPP5Q8N3R9 675 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 FAM71DQ8N9W8 422 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 VPS50Q96JG6 964 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 CDCP1Q9H5V8 836 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
XRN1-206ENST00000467077 INSL5Q9Y5Q6 135 aa4.5□□□□□ -1.69
XRN1-206ENST00000467077 ERI2A8K979 691 aaKnown RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 HOXC6P09630 235 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 ADRA1DP25100 572 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 RECQLP46063 649 aaPredicted RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 GPC5P78333 572 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 DLGAP5Q15398 846 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 ST3GAL2Q16842 350 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 INO80DQ53TQ3 878 aaPredicted RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 RBM44Q6ZP01 1051 aaKnown RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 UEVLDQ8IX04 471 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 FAM177A1Q8N128 213 aaPredicted RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 KAZALD1Q96I82 304 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 PIMREGQ9BSJ6 248 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 CDT1Q9H211 546 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 MOV10Q9HCE1 1003 aaKnown RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 PIH1D1Q9NWS0 290 aaKnown RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 NKX1-2Q9UD57 310 aaPredicted RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 KCNG2Q9UJ96 466 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 TOP2AP11388 1531 aaKnown RBP4.49□□□□□ -1.69
XRN1-206ENST00000467077 TOPBP1Q92547 1522 aa4.49□□□□□ -1.69
XRN1-206ENST00000467077 RSF1Q96T23 1441 aaPredicted RBP4.48□□□□□ -1.69
XRN1-206ENST00000467077 TARBP1Q13395 1621 aaKnown RBP4.48□□□□□ -1.69
XRN1-206ENST00000467077 A0A0G2JK05 382 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 A8MVJ9 347 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 SNUPNO95149 360 aaKnown RBP4.48□□□□□ -1.69
XRN1-206ENST00000467077 RASAL1O95294 804 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 SERPINB2P05120 415 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 ST6GAL1P15907 406 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 MCM5P33992 734 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 RFX2P48378 723 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 SHBQ15464 509 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 TMEM240Q5SV17 173 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 ZNF783Q6ZMS7 281 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 ZBTB46Q86UZ6 589 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 PRR18Q8N4B5 295 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 SPEM1Q8N4L4 309 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 CHMP4CQ96CF2 233 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 CDY1Q9Y6F8 540 aa4.48□□□□□ -1.69
XRN1-206ENST00000467077 AQRO60306 1485 aaKnown RBP eCLIP4.48□□□□□ -1.69
XRN1-206ENST00000467077 BTBD18B2RXH4 712 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 ATG13O75143 517 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 TIAL1Q01085 375 aaKnown RBP eCLIP4.47□□□□□ -1.69
XRN1-206ENST00000467077 CCDC15Q0P6D6 951 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 FAM76BQ5HYJ3 339 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 MSI2Q96DH6 328 aaKnown RBP4.47□□□□□ -1.69
XRN1-206ENST00000467077 P2RX7Q99572 595 aaKnown RBP4.47□□□□□ -1.69
XRN1-206ENST00000467077 HTATIP2Q9BUP3 242 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 CINPQ9BW66 212 aaPredicted RBP4.47□□□□□ -1.69
XRN1-206ENST00000467077 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 TRIM5Q9C035 493 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 MLXIPLQ9NP71 852 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 ASAP1Q9ULH1 1129 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 ABCC8Q09428 1581 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 DNMBPQ6XZF7 1577 aa4.47□□□□□ -1.69
XRN1-206ENST00000467077 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.69
XRN1-206ENST00000467077 SYNJ1O43426 1573 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 hCG_2014768A0A024R1R8 64 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 A0A1B0GUV1 79 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 SMTNL1A8MU46 457 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 CD3EAPO15446 510 aaKnown RBP4.46□□□□□ -1.7
XRN1-206ENST00000467077 NEK2P51955 445 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 WDR5P61964 334 aaKnown RBP4.46□□□□□ -1.7
XRN1-206ENST00000467077 DEUP1Q05D60 604 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 INSCQ1MX18 579 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 SMTNL2Q2TAL5 461 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 ANO6Q4KMQ2 910 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms