RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GBX1Q14549 363 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 ACOX1Q15067 660 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 RNF220Q5VTB9 566 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 CLEC9AQ6UXN8 241 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 ZNF793Q6ZN11 406 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 MMP21Q8N119 569 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 SUN3Q8TAQ9 357 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 MSI2Q96DH6 328 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 LYZL4Q96KX0 146 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 HIST1H2AAQ96QV6 131 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 RNF26Q9BY78 433 aaPredicted RBP3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 NUAK2Q9H093 628 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 USP29Q9HBJ7 922 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 TMEM8AQ9HCN3 771 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 OGDHLQ9ULD0 1010 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 CNTNAP2Q9UHC6 1331 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 SLC22A23A1A5C7 686 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 ZNF814B7Z6K7 855 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 PRR23D1E9PI22 279 aaPredicted RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 H3BNX3 289 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 GOLIM4O00461 696 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 EPN2O95208 641 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 PRR23D2P0DMB1 279 aaPredicted RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 TMIGD3P0DMS9 266 aaPredicted RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 TMEM225BP0DP42 221 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 ZKSCAN1P17029 563 aaPredicted RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 RPS6KB1P23443 525 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 JAK3P52333 1124 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 CCDC15Q0P6D6 951 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 SEMA5AQ13591 1074 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 GRM3Q14832 879 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 ODF3L2Q3SX64 289 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 EARS2Q5JPH6 523 aaKnown RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 ASPHD1Q5U4P2 390 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 KIAA1161Q6NSJ0 714 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 COLCA1Q6ZS62 124 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 SRGAP1Q7Z6B7 1085 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM177A1Q8N128 213 aaPredicted RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 NGDNQ8NEJ9 315 aaKnown RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 TRMT61AQ96FX7 289 aaKnown RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 SNX22Q96L94 193 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 BTBD1Q9H0C5 482 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 ZCWPW1Q9H0M4 648 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 SIRT4Q9Y6E7 314 aaPredicted RBP3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 SQORQ9Y6N5 450 aa3.56□□□□□ -1.84
GTF3C3-209ENST00000466862 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 FOXN3O00409 490 aaPredicted RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 PRYO14603 147 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 CRYABP02511 175 aaKnown RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM193AP78312 1265 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 KCNJ12Q14500 433 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 PPP2R5AQ15172 486 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 UBAP2Q5T6F2 1119 aaKnown RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM90A2PQ658T7 463 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 RBM44Q6ZP01 1051 aaKnown RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 RFX6Q8HWS3 928 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 RBMXL3Q8N7X1 1067 aaKnown RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 BCAS4Q8TDM0 211 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 SMCR8Q8TEV9 937 aaPredicted RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 VPS50Q96JG6 964 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 CINPQ9BW66 212 aaPredicted RBP3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 SCNM1Q9BWG6 230 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 SLC25A32Q9H2D1 315 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 ZNF287Q9HBT7 754 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 ABHD10Q9NUJ1 306 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 MSRB1Q9NZV6 116 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 ZNF212Q9UDV6 495 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 ITGB1BP2Q9UKP3 347 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 PCDHA12Q9UN75 941 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 EID1Q9Y6B2 187 aa3.55□□□□□ -1.84
GTF3C3-209ENST00000466862 TRBV5-3A0A0A0MS03 114 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 ATG13O75143 517 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 IL18RAPO95256 599 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 RHCEP18577 417 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 MST1P26927 711 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 NDUFS1P28331 727 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 PBX1P40424 430 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 SOX2P48431 317 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 RHDQ02161 417 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 GAB1Q13480 694 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 PFKFB3Q16875 520 aaPredicted RBP3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 ARHGAP29Q52LW3 1261 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 TTLL5Q6EMB2 1281 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 ABLIM2Q6H8Q1 611 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 ZNF549Q6P9A3 640 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 CCDC149Q6ZUS6 474 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM57BQ71RH2 274 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 KRT28Q7Z3Y7 464 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 PIM3Q86V86 326 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 ACRBPQ8NEB7 543 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 B4GALNT2Q8NHY0 566 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 MOV10Q9HCE1 1003 aaKnown RBP3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 TMEM45AQ9NWC5 275 aa3.54□□□□□ -1.84
GTF3C3-209ENST00000466862 IGLV5-39A0A0G2JS06 123 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 CLCA1A8K7I4 914 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 TSPAN6O43657 245 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 MGEA5O60502 916 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 SNX2O60749 519 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 MAP4K4O95819 1239 aaPredicted RBP3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 ANXA2P07355 339 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms