RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	RRAGA	Q7L523	313 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	KRT27	Q7Z3Y8	459 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	LRRTM4	Q86VH4	590 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	SFTPA1	Q8IWL2	248 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	USP38	Q8NB14	1042 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	NAXE	Q8NCW5	288 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	ABHD11	Q8NFV4	315 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	HERVK_113	Q902F9	699 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	TFAP2B	Q92481	460 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	WDYHV1	Q96HA8	205 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	REXO5	Q96IC2	774 aa	Known RBP	4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	FAR2	Q96K12	515 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	PPM1M	Q96MI6	270 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	PRR25	Q96S07	402 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	CINP	Q9BW66	212 aa	Predicted RBP	4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	CCDC134	Q9H6E4	229 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	KCNK9	Q9NPC2	374 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	SNX15	Q9NRS6	342 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	DUSP22	Q9NRW4	184 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	PI4KB	Q9UBF8	816 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	BAG5	Q9UL15	447 aa		4.97	□□□□□ -1.61
CDC42BPA-211	ENST00000466538	LOC105369274	A0A096LPK9	316 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	LOC102723532	A0A0G2JNH3	316 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	KIF28P	B7ZC32	967 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	AP4M1	O00189	453 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CES2	O00748	559 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	SEPT4	O43236	478 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	HOXC11	O43248	304 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CKMT1A	P12532	417 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	NDUFB7	P17568	137 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	YY1	P25490	414 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MCM5	P33992	734 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	VAMP2	P63027	116 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	RBM6	P78332	1123 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MRPS35	P82673	323 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	E2F1	Q01094	437 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	BFSP2	Q13515	415 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	AARS2	Q5JTZ9	985 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	ACSM6	Q6P461	480 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	P3H2	Q8IVL5	708 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	OR4N4	Q8N0Y3	316 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CSGALNACT1	Q8TDX6	532 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	GOLGA1	Q92805	767 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MAEL	Q96JY0	434 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	KRTAP4-12	Q9BQ66	201 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	WASH6P	Q9NQA3	447 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	DLL3	Q9NYJ7	618 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	LRIT1	Q9P2V4	623 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	TMEM98	Q9Y2Y6	226 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	DERA	Q9Y315	318 aa		4.96	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CCDC196	A0A1B0GTZ2	297 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	SAC3D1	A6NKF1	404 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	PRRT4	C9JH25	899 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	QSOX1	O00391	747 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	NKX2-8	O15522	239 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	AGR2	O95994	175 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	NPS	P0C0P6	89 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	JUP	P14923	745 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	XBP1	P17861	261 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MATN1	P21941	496 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CTGF	P29279	349 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CYP2C18	P33260	490 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	SEC24C	P53992	1094 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	TXNL4A	P83876	142 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CCDC15	Q0P6D6	951 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	ANKRD1	Q15327	319 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	FAM187B	Q17R55	369 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	AAK1	Q2M2I8	961 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	DGAT2L7P	Q6IED9	249 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	RASGRP2	Q7LDG7	609 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	SPRED1	Q7Z699	444 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	ULK2	Q8IYT8	1036 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	C12orf76	Q8N812	135 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	FAM71D	Q8N9W8	422 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	SIMC1	Q8NDZ2	872 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	OR52L2P	Q8NGH6	319 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	GLMP	Q8WWB7	406 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	ASB12	Q8WXK4	309 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CAVIN3	Q969G5	261 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	RILPL2	Q969X0	211 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MPP4	Q96JB8	637 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	COG8	Q96MW5	612 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	THAP7	Q9BT49	309 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MMRN2	Q9H8L6	949 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CHODL	Q9H9P2	273 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	GAR1	Q9NY12	217 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	PCDHB7	Q9Y5E2	793 aa		4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	SLC38A8	A6NNN8	435 aa		4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	HNRNPR	O43390	633 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	KRT38	O76015	456 aa		4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	ADRB1	P08588	477 aa		4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CYP3A4	P08684	503 aa		4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	CNP	P09543	421 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	DUSP1	P28562	367 aa		4.94	□□□□□ -1.62
CDC42BPA-211	ENST00000466538	PCSK6	P29122	969 aa		4.94	□□□□□ -1.62

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