RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 GAS6Q14393 721 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 SYCP1Q15431 976 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 TMEM196Q5HYL7 178 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 KLHDC7AQ5VTJ3 777 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 PM20D1Q6GTS8 502 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 PKN3Q6P5Z2 889 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 C1orf228Q6PIY5 440 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 RHBDF2Q6PJF5 856 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 FMNL3Q8IVF7 1028 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 DHX40Q8IX18 779 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 SCUBE3Q8IX30 993 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 ADGRG2Q8IZP9 1017 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 NEK11Q8NG66 645 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 CLDN23Q96B33 292 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 NAP1L5Q96NT1 182 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 CDK5RAP1Q96SZ6 601 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 GANQ9H2C0 597 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 CHRDQ9H2X0 955 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 CNGB3Q9NQW8 809 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 POLR3BQ9NW08 1133 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 PLK2Q9NYY3 685 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 MARCH2Q9P0N8 246 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 LIMA1Q9UHB6 759 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 CYTH4Q9UIA0 394 aa10.19□□□□□ -0.78
RTFDC1-205ENST00000466260 SMTNL1A8MU46 457 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 TRDMT1O14717 391 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 CAPN9O14815 690 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 EPHB6O15197 1021 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 GFPT2O94808 682 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 LTFP02788 710 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 SP9P0CG40 484 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 NCAM1P13591 858 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 RPS9P46781 194 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 GAD2Q05329 585 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 PDCLQ13371 301 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 CCINQ13939 588 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 DGKKQ5KSL6 1271 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 HEATR6Q6AI08 1181 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 HTR3DQ70Z44 454 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 TMEM25Q86YD3 366 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 DENND1CQ8IV53 801 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 SFTPA1Q8IWL2 248 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 RPLP0P6Q8NHW5 317 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 ADAM32Q8TC27 787 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 EXOC4Q96A65 974 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 HSFY1Q96LI6 401 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 SPAG5Q96R06 1193 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 BBS2Q9BXC9 721 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 HSD3B7Q9H2F3 369 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 SYNCQ9H7C4 482 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 SPHK2Q9NRA0 654 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 ABCC13Q9NSE7 274 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 OLA1Q9NTK5 396 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 C2orf42Q9NWW7 574 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 CEP83Q9Y592 693 aa10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 MYO18AQ92614 2054 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-205ENST00000466260 SYNJ2BP-COX16A0A087WUM0 186 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 LGALS16A8MUM7 142 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 F8VZ95 297 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 TRIM24O15164 1050 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 TSPAN3O60637 253 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 GRAP2O75791 330 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 KLKB1P03952 638 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 APODP05090 189 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 MMEP08473 750 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 NUDT7P0C024 238 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 ZNF18P17022 549 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 DRD1P21728 446 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 ACADSBP45954 432 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 CXCL12P48061 93 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 CCR3P51677 355 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 MLLT6P55198 1093 aaPredicted RBP10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 COG7P83436 770 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 ARID5AQ03989 594 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 MESP2Q0VG99 397 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 GAB4Q2WGN9 574 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 C2orf27AQ580R0 203 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 OR6B2Q6IFH4 312 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 DPY19L2P1Q6NXN4 242 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 KLHDC10Q6PID8 442 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 FAM71AQ8IYT1 594 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 IPO4Q8TEX9 1081 aaKnown RBP10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 IRGQQ8WZA9 623 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 EZH1Q92800 747 aaPredicted RBP10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 ERLEC1Q96DZ1 483 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 PIWIL1Q96J94 861 aaKnown RBP10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 CPXM1Q96SM3 734 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 FUCA2Q9BTY2 467 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 NAA15Q9BXJ9 866 aaKnown RBP10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 IRF2BPLQ9H1B7 796 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 CBX8Q9HC52 389 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 ARHGEF4Q9NR80 690 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 COX16Q9P0S2 106 aa10.17□□□□□ -0.78
RTFDC1-205ENST00000466260 NAALADL1Q9UQQ1 740 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms