RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FZD10Q9ULW2 581 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 SHOC2Q9UQ13 582 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 TTC3P53804 2025 aa18.97■□□□□ 0.63
COL9A3-205ENST00000466192 SYNJ2BP-COX16A0A087WUM0 186 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 DNM1LO00429 736 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 MAP3K6O95382 1288 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 BHLHA9Q7RTU4 235 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 COLGALT2Q8IYK4 626 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 TMPRSS4Q9NRS4 437 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 COX16Q9P0S2 106 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 STAP1Q9ULZ2 295 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.96■□□□□ 0.63
COL9A3-205ENST00000466192 H7C0C1 242 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 CHN1P15882 459 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 TYMPP19971 482 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 ATP5OP48047 213 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 GAD2Q05329 585 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 FAM182AQ5T1J6 154 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 ANKRD22Q5VYY1 191 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 PCGF5Q86SE9 256 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 NLRP14Q86W24 1093 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 ZBED8Q8IZ13 594 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 THEM5Q8N1Q8 247 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 ZNF784Q8NCA9 323 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-205ENST00000466192 URGCPQ8TCY9 931 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 CPT1BQ92523 772 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 CSPG4P5Q96PW8 444 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 USP29Q9HBJ7 922 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 PIGVQ9NUD9 493 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 DNAJB4Q9UDY4 337 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 PCDHB8Q9UN66 801 aa18.96■□□□□ 0.63
COL9A3-205ENST00000466192 ZBED1O96006 694 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 STIP1P31948 543 aaKnown RBP18.95■□□□□ 0.62
COL9A3-205ENST00000466192 NME3Q13232 169 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 EXOC3L1Q86VI1 746 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 PPIL6Q8IXY8 311 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 DBF4BQ8NFT6 615 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 CCT8L2Q96SF2 557 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 TBK1Q9UHD2 729 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 USP3Q9Y6I4 520 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 FOXO6A8MYZ6 492 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 CAPN9O14815 690 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 BANF1O75531 89 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 GOT1P17174 413 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 RDXP35241 583 aaKnown RBP18.95■□□□□ 0.62
COL9A3-205ENST00000466192 YWHAHQ04917 246 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-205ENST00000466192 PDIA2Q13087 525 aaKnown RBP18.95■□□□□ 0.62
COL9A3-205ENST00000466192 BFSP2Q13515 415 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 HIF1AQ16665 826 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 CAPN12Q6ZSI9 719 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 TAOK1Q7L7X3 1001 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 ADAM32Q8TC27 787 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 ARHGEF2Q92974 986 aaKnown RBP18.95■□□□□ 0.62
COL9A3-205ENST00000466192 TMEM161AQ9NX61 479 aa18.95■□□□□ 0.62
COL9A3-205ENST00000466192 ARHGEF37A1IGU5 675 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 ENPP3O14638 875 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 NDC80O14777 642 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 TRAPPC3O43617 180 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 LTFP02788 710 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 OR1G1P47890 313 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 TSPY1Q01534 308 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 GBE1Q04446 702 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 RNASELQ05823 741 aaKnown RBP18.94■□□□□ 0.62
COL9A3-205ENST00000466192 DEUP1Q05D60 604 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 SLC10A2Q12908 348 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-205ENST00000466192 MTFR1Q15390 333 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 PLEKHG4Q58EX7 1191 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 CENPUQ71F23 418 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 NAT8LQ8N9F0 302 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 SLC7A14Q8TBB6 771 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 LRRN4Q8WUT4 740 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 CCDC77Q9BR77 488 aa18.94■□□□□ 0.62
COL9A3-205ENST00000466192 DMAP1Q9NPF5 467 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-205ENST00000466192 PAK6Q9NQU5 681 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-205ENST00000466192 COL4A4P53420 1690 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-205ENST00000466192 TCRBV7S3A2A0A539 114 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 GMNCA6NCL1 334 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 EBAG9O00559 213 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 TCEA3O75764 348 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 FAM107AO95990 144 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 AMPD1P23109 780 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 BASP1P80723 227 aaKnown RBP18.93■□□□□ 0.62
COL9A3-205ENST00000466192 STAT4Q14765 748 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 PSTKQ8IV42 348 aaKnown RBP18.93■□□□□ 0.62
COL9A3-205ENST00000466192 ZNF473Q8WTR7 871 aaKnown RBP18.93■□□□□ 0.62
COL9A3-205ENST00000466192 ETNK2Q9NVF9 386 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 KANSL3Q9P2N6 904 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 PRG3Q9Y2Y8 225 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-205ENST00000466192 MFHAS1Q9Y4C4 1052 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 A0A087WUV0 522 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-205ENST00000466192 TMEM189-UBE2V1I3L0A0 370 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 ABHD2P08910 425 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 NCAM1P13591 858 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 RBL1P28749 1068 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 MTM1Q13496 603 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 MAPRE1Q15691 268 aaKnown RBP18.93■□□□□ 0.62
COL9A3-205ENST00000466192 PM20D1Q6GTS8 502 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 ANKMY2Q8IV38 441 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 CCDC13Q8IYE1 715 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms