RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 BDNFP23560 247 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 DDIT3P35638 169 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 CPT1AP50416 773 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 IRAK1P51617 712 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 MESP2Q0VG99 397 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 ARHGEF7Q14155 803 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 TAF12Q16514 161 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 PLA1AQ53H76 456 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 NOMO2Q5JPE7 1267 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 CCDC158Q5M9N0 1113 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 TTC39AQ5SRH9 613 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 TMTC4Q5T4D3 741 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 RAP1GAP2Q684P5 730 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 PLAG1Q6DJT9 500 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 EFCAB12Q6NXP0 572 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 NAXEQ8NCW5 288 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 PPHLN1Q8NEY8 458 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 USP13Q92995 863 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 NEIL1Q96FI4 390 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 PPM1MQ96MI6 270 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 PRPF18Q99633 342 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 MESP1Q9BRJ9 268 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 TLR10Q9BXR5 811 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 DHX36Q9H2U1 1008 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 ZHX3Q9H4I2 956 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 ZMYND8Q9ULU4 1186 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 OAZ3Q9UMX2 235 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 SMG5Q9UPR3 1016 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 ATP11BQ9Y2G3 1177 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 TTC41PQ6P2S7 1318 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 FAM205AQ6ZU69 1335 aa6.75□□□□□ -1.33
PRPF4B-204ENST00000466185 TCAF2A6NFQ2 919 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 RFXAPO00287 272 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 CCP110O43303 1012 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 B4GALT3O60512 393 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 VPS4BO75351 444 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 RAD17O75943 681 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 MX1P20591 662 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 AFF3P51826 1226 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 GEMIN4P57678 1058 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 CXCL9Q07325 125 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 BOP1Q14137 746 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 TNIP1Q15025 636 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 ZNF385BQ569K4 471 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 STRIP1Q5VSL9 837 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 MED25Q71SY5 747 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 MOGAT3Q86VF5 341 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 TICAM2Q86XR7 235 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 ZFPM1Q8IX07 1006 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 C16orf71Q8IYS4 520 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 OTUD7AQ8TE49 926 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 MOGAT1Q96PD6 335 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 CPPED1Q9BRF8 314 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 ECHDC1Q9NTX5 307 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 ETAA1Q9NY74 926 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 DKK4Q9UBT3 224 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 CRYL1Q9Y2S2 319 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 SBF1O95248 1867 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 SALL1Q9NSC2 1324 aa6.74□□□□□ -1.33
PRPF4B-204ENST00000466185 A0A0B4J269 797 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 DRGXA6NNA5 263 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 J3KRW8 73 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 PSMD14O00487 310 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 DCLK1O15075 740 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 CDC14BO60729 498 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 FRAT2O75474 233 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 FCER1AP12319 257 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 NPPBP16860 134 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 TPH1P17752 444 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 CR2P20023 1033 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 RPS12P25398 132 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 TOB1P50616 345 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 PDE1AP54750 535 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 FKBP1AP62942 108 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 FOXD4Q12950 439 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 INTS11Q5TA45 600 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 TSHZ3Q63HK5 1081 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 TTLL5Q6EMB2 1281 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 KCTD20Q7Z5Y7 419 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 GATAD2AQ86YP4 633 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 CCDC28AQ8IWP9 274 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 GPC2Q8N158 579 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 CFAP52Q8N1V2 620 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 OR1N1Q8NGS0 311 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 TBC1D22AQ8WUA7 517 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 SKA1Q96BD8 255 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 SLC46A1Q96NT5 459 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 TTYH3Q9C0H2 523 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 MLXIPQ9HAP2 919 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 MSL2Q9HCI7 577 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 VPS45Q9NRW7 570 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 ZSCAN32Q9NX65 697 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 HMG20BQ9P0W2 317 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 JAG2Q9Y219 1238 aa6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 DICER1Q9UPY3 1922 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-204ENST00000466185 AOX1Q06278 1338 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms