RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TTC3P53804 2025 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 COL15A1P39059 1388 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 A6NNZ2 444 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 TNFRSF1BP20333 461 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 IL6STP40189 918 aaPredicted RBP6.01□□□□□ -1.45
SMC4-205ENST00000465563 CDKN2AP42771 156 aaKnown RBP6.01□□□□□ -1.45
SMC4-205ENST00000465563 DNASE1L3Q13609 305 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 GRHL2Q6ISB3 625 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 PELI3Q8N2H9 469 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 SDR16C5Q8N3Y7 309 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 SMRP1Q8NCR6 262 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 SPATA3Q8NHX4 192 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 PIGKQ92643 395 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 MLXIPQ9HAP2 919 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 AGO4Q9HCK5 861 aaKnown RBP6.01□□□□□ -1.45
SMC4-205ENST00000465563 ZNF212Q9UDV6 495 aa6.01□□□□□ -1.45
SMC4-205ENST00000465563 MGEA5O60502 916 aa6□□□□□ -1.45
SMC4-205ENST00000465563 WDR47O94967 919 aa6□□□□□ -1.45
SMC4-205ENST00000465563 MBPP02686 304 aaPredicted RBP6□□□□□ -1.45
SMC4-205ENST00000465563 SLC12A2P55011 1212 aa6□□□□□ -1.45
SMC4-205ENST00000465563 KRTAP10-6P60371 365 aaPredicted RBP6□□□□□ -1.45
SMC4-205ENST00000465563 ODR4Q5SWX8 454 aa6□□□□□ -1.45
SMC4-205ENST00000465563 DARS2Q6PI48 645 aaKnown RBP6□□□□□ -1.45
SMC4-205ENST00000465563 CCDC149Q6ZUS6 474 aa6□□□□□ -1.45
SMC4-205ENST00000465563 MBD3L2Q8NHZ7 208 aaPredicted RBP6□□□□□ -1.45
SMC4-205ENST00000465563 SLC25A28Q96A46 364 aa6□□□□□ -1.45
SMC4-205ENST00000465563 PRR11Q96HE9 360 aaPredicted RBP6□□□□□ -1.45
SMC4-205ENST00000465563 MSLNLQ96KJ4 702 aa6□□□□□ -1.45
SMC4-205ENST00000465563 CAMK1GQ96NX5 476 aa6□□□□□ -1.45
SMC4-205ENST00000465563 SELENOOQ9BVL4 669 aa6□□□□□ -1.45
SMC4-205ENST00000465563 MLXIPLQ9NP71 852 aa6□□□□□ -1.45
SMC4-205ENST00000465563 THRAP3Q9Y2W1 955 aaKnown RBP6□□□□□ -1.45
SMC4-205ENST00000465563 HEMK1Q9Y5R4 338 aaPredicted RBP6□□□□□ -1.45
SMC4-205ENST00000465563 SIRT4Q9Y6E7 314 aaPredicted RBP6□□□□□ -1.45
SMC4-205ENST00000465563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.99□□□□□ -1.45
SMC4-205ENST00000465563 GOLIM4O00461 696 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 T-ENOLP0DO92 83 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 RPS6KB1P23443 525 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 YY1P25490 414 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 HOXA7P31268 230 aaPredicted RBP5.99□□□□□ -1.45
SMC4-205ENST00000465563 HTR7P34969 479 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 KIAA0753Q2KHM9 967 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 SRGAP1Q7Z6B7 1085 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 TFAP2DQ7Z6R9 452 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 FAM156AQ8NDB6 213 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 P2RY11Q96G91 374 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 FAM227BQ96M60 508 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 TUBB6Q9BUF5 446 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 SAP30LQ9HAJ7 183 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 TMEM8AQ9HCN3 771 aa5.99□□□□□ -1.45
SMC4-205ENST00000465563 SLC22A23A1A5C7 686 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 C16orf96A6NNT2 1141 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 FOXN3O00409 490 aaPredicted RBP5.98□□□□□ -1.45
SMC4-205ENST00000465563 SYF2O95926 243 aaKnown RBP5.98□□□□□ -1.45
SMC4-205ENST00000465563 MT-ND5P03915 603 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 FGF2P09038 288 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 DGKQP52824 942 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 RAE1P78406 368 aaKnown RBP5.98□□□□□ -1.45
SMC4-205ENST00000465563 MTAPQ13126 283 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 MTA1Q13330 715 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 CNGA3Q16281 694 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 UBAP2Q5T6F2 1119 aaKnown RBP5.98□□□□□ -1.45
SMC4-205ENST00000465563 NXNQ6DKJ4 435 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 PPP4R4Q6NUP7 873 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 RBM44Q6ZP01 1051 aaKnown RBP5.98□□□□□ -1.45
SMC4-205ENST00000465563 SKAP1Q86WV1 359 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 RAVER1Q8IY67 606 aaKnown RBP5.98□□□□□ -1.45
SMC4-205ENST00000465563 MAGEB6Q8N7X4 407 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 SNX22Q96L94 193 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 DECR2Q9NUI1 292 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
SMC4-205ENST00000465563 F8W810 466 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 SCGB1D2O95969 90 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 HRGP04196 525 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 ALDH7A1P49419 539 aaKnown RBP5.97□□□□□ -1.45
SMC4-205ENST00000465563 ACOX1Q15067 660 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 AASDHQ4L235 1098 aaPredicted RBP5.97□□□□□ -1.45
SMC4-205ENST00000465563 UEVLDQ8IX04 471 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 TCEAL8Q8IYN2 117 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 SUN3Q8TAQ9 357 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 SLC25A32Q9H2D1 315 aa5.97□□□□□ -1.45
SMC4-205ENST00000465563 ZNF814B7Z6K7 855 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 CTIFO43310 598 aaKnown RBP5.96□□□□□ -1.46
SMC4-205ENST00000465563 TLX3O43711 291 aaPredicted RBP5.96□□□□□ -1.46
SMC4-205ENST00000465563 NDUFB8O95169 186 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 ZBED1O96006 694 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 PEX2P28328 305 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 FAM193AP78312 1265 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 FHL3Q13643 280 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 PPP2R5AQ15172 486 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 PRTGQ2VWP7 1150 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 RNF44Q7L0R7 432 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 SLC44A5Q8NCS7 719 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 RNF26Q9BY78 433 aaPredicted RBP5.96□□□□□ -1.46
SMC4-205ENST00000465563 PAPOLBQ9NRJ5 636 aaKnown RBP5.96□□□□□ -1.46
SMC4-205ENST00000465563 ABHD10Q9NUJ1 306 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
SMC4-205ENST00000465563 VPS4AQ9UN37 437 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 COG5Q9UP83 839 aa5.96□□□□□ -1.46
SMC4-205ENST00000465563 TTC34A8MYJ7 566 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms