RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 TBX2Q13207 712 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 NOGQ13253 232 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 COG2Q14746 738 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 ETFDHQ16134 617 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 PTPN21Q16825 1174 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 TBC1D25Q3MII6 688 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 C10orf76Q5T2E6 689 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 INTS11Q5TA45 600 aaKnown RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 PRAMEF17Q5VTA0 474 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 MORN5Q5VZ52 161 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 ISM2Q6H9L7 571 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 TMEM108Q6UXF1 575 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 KSR2Q6VAB6 950 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 SLC29A4Q7RTT9 530 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 MAVSQ7Z434 540 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 HEATR3Q7Z4Q2 680 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 WDR53Q7Z5U6 358 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 SDCCAG8Q86SQ7 713 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 PPP1R3BQ86XI6 285 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 TCEAL8Q8IYN2 117 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 CCAR2Q8N163 923 aaKnown RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 ARL10Q8N8L6 244 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 FANCBQ8NB91 859 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 LILRB1Q8NHL6 650 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 SUN5Q8TC36 379 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 TEKT4Q8WW24 435 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 IPCEF1Q8WWN9 437 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 DDX17Q92841 729 aaKnown RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 JAKMIP2Q96AA8 810 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 MTMR8Q96EF0 704 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 ZNF48Q96MX3 618 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 FCRL4Q96PJ5 515 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 NEK1Q96PY6 1258 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 STRBPQ96SI9 672 aaKnown RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 SH2D3AQ9BRG2 576 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 AP1M1Q9BXS5 423 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 WDCPQ9H6R7 721 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 TBC1D7Q9P0N9 293 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 SPATA7Q9P0W8 599 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 LUC7L2Q9Y383 392 aaKnown RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 ITIH6Q6UXX5 1313 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 SYNJ2BP-COX16A0A087WUM0 186 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 GOLGA6L10A0A0M3HER8 536 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ADAMTS3O15072 1205 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 DCLK1O15075 740 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 SLC16A3O15427 465 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 P4HA2O15460 535 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ZSCAN9O15535 394 aaPredicted RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 KCNAB3O43448 404 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TLR5O60602 858 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TUBB4AP04350 444 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 IL6RP08887 468 aaPredicted RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 IFIT2P09913 472 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 TNFAIP3P21580 790 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 RPS6KB1P23443 525 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CYP2C18P33260 490 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 HSPA4P34932 840 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 RAD52P43351 418 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TM4SF4P48230 202 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 PEX5P50542 639 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 HSD17B7P56937 341 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 EEFSECP57772 596 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 NUCB2P80303 420 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 MRPL28Q13084 256 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 PRKG2Q13237 762 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 SUPT20HL1Q3ZLR7 823 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 BOLA3Q53S33 107 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 RILPL1Q5EBL4 403 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TREML2Q5T2D2 321 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CFAP58Q5T655 872 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TEDDM1Q5T9Z0 273 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 THEMIS2Q5TEJ8 643 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 SFMBT2Q5VUG0 894 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CCDC30Q5VVM6 783 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 FAM160B1Q5W0V3 765 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ANO1Q5XXA6 986 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 SFRP4Q6FHJ7 346 aaPredicted RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 SLC18B1Q6NT16 456 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TATDN1Q6P1N9 297 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 NEK10Q6ZWH5 1172 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CCDC80Q76M96 950 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 GALNT5Q7Z7M9 940 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 SRLQ86TD4 932 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 PEX5LQ8IYB4 626 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 MIER2Q8N344 545 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 NKAPQ8N5F7 415 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 LSMEM1Q8N8F7 131 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 TRIML1Q8N9V2 468 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 FAM46DQ8NEK8 389 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CCDC26Q8TAB7 109 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 FAM76AQ8TAV0 307 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 KIAA1524Q8TCG1 905 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 JPH3Q8WXH2 748 aaPredicted RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 USP6NLQ92738 828 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ARHGEF2Q92974 986 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 SNX21Q969T3 373 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 LRRC45Q96CN5 670 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 BICD1Q96G01 975 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 PPM1MQ96MI6 270 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CAPS2Q9BXY5 557 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms