RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	EFEMP1	Q12805	493 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	HADH	Q16836	314 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	RARS2	Q5T160	578 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	MSANTD2	Q6P1R3	559 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	SCYL2	Q6P3W7	929 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	BNIPL	Q7Z465	357 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	TADA2B	Q86TJ2	420 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	MICALL1	Q8N3F8	863 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	CMAS	Q8NFW8	434 aa	Predicted RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	SMG7	Q92540	1137 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	MRPS31	Q92665	395 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	CD101	Q93033	1021 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	PGAP3	Q96FM1	320 aa	Predicted RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	NAPG	Q99747	312 aa	Predicted RBP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	APOL5	Q9BWW9	433 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	NACA2	Q9H009	215 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	ATXN3L	Q9H3M9	355 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	PIGV	Q9NUD9	493 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	PCSK1N	Q9UHG2	260 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	USP18	Q9UMW8	372 aa		13.96	□□□□□ -0.17
ATF3-208	ENST00000465155	MSI1	O43347	362 aa	Known RBP	13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	ENDOD1	O94919	500 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	FGF19	O95750	216 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	F9	P00740	461 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	OAS1	P00973	400 aa	Known RBP	13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	IGLV3-25	P01717	112 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	GBP1	P32455	592 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	GJC1	P36383	396 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	ATP5C1	P36542	298 aa	Known RBP	13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	CCR2	P41597	374 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	TUB	P50607	506 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	NTHL1	P78549	312 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	SLC25A11	Q02978	314 aa	Known RBP	13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	ADAM15	Q13444	863 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	RPS6KA1	Q15418	735 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	TXNDC8	Q6A555	127 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	ANKRD54	Q6NXT1	300 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	MIB1	Q86YT6	1006 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	RHOT1	Q8IXI2	618 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	ZNF276	Q8N554	614 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	LEMD2	Q8NC56	503 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	KRT35	Q92764	455 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	HES6	Q96HZ4	224 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	SERPINB11	Q96P15	392 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	NCAPG	Q9BPX3	1015 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	TLR10	Q9BXR5	811 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	ZWILCH	Q9H900	591 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	TRPC7	Q9HCX4	862 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	MARCH2	Q9P0N8	246 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	RASAL2	Q9UJF2	1139 aa		13.95	□□□□□ -0.18
ATF3-208	ENST00000465155	CCDC66	A2RUB6	948 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	MIF4GD	A9UHW6	222 aa	Known RBP	13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	NRG2	O14511	850 aa	Predicted RBP	13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	IRAK2	O43187	625 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	COCH	O43405	550 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	PRPSAP2	O60256	369 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	PAPLN	O95428	1278 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	CTNNA2	P26232	953 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	IL1R2	P27930	398 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	CTNNA1	P35221	906 aa	Known RBP	13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	MARCKSL1	P49006	195 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	SLC5A9	Q2M3M2	681 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	SMTNL2	Q2TAL5	461 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	TXNRD3NB	Q6F5E7	133 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	KLHDC10	Q6PID8	442 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	EP400NL	Q6ZTU2	488 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	5e-6	■■■■□ 22.5
ATF3-208	ENST00000465155	FAM131B	Q86XD5	332 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	UBL4B	Q8N7F7	174 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	SHKBP1	Q8TBC3	707 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	RNF34	Q969K3	372 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	TCEAL4	Q96EI5	215 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	PEBP4	Q96S96	227 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	PSMB7	Q99436	277 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	WDR6	Q9NNW5	1121 aa	Known RBP	13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	CLDND1	Q9NY35	253 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	DNMT3L	Q9UJW3	386 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	PCDHA3	Q9Y5H8	950 aa		13.94	□□□□□ -0.18
ATF3-208	ENST00000465155	DDX3Y	O15523	660 aa	Known RBP	13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	PSTPIP1	O43586	416 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	KCNT1	Q5JUK3	1230 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	PRSS36	Q5K4E3	855 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	ZFYVE27	Q5T4F4	411 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	STXBP5	Q5T5C0	1151 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	SYCE2	Q6PIF2	218 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155		Q7L0L9	218 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	CCDC185	Q8N715	623 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	MAB21L3	Q8N8X9	362 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	RNF38	Q9H0F5	515 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	TLR6	Q9Y2C9	796 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	SLC12A8	A0AV02	714 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	ZNF197	O14709	1029 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	TBX10	O75333	385 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	MOSPD3	O75425	235 aa		13.93	□□□□□ -0.18
ATF3-208	ENST00000465155	HMBS	P08397	361 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms