RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PHF24Q9UPV7 400 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 HHLA1C9JL84 531 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 NRP1O14786 923 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 TYMPP19971 482 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 ATP5DP30049 168 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 GRK4P32298 578 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 ARL4AP40617 200 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 ARL4CP56559 192 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 IFI35P80217 286 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 FAM189BP81408 668 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 ACTN3Q08043 901 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 IFT88Q13099 833 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 XRCC4Q13426 336 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 HFE2Q6ZVN8 426 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 FAM131BQ86XD5 332 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 HASPINQ8TF76 798 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 SEC16BQ96JE7 1060 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 CABS1Q96KC9 395 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 CSPG4P5Q96PW8 444 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 CAPN7Q9Y6W3 813 aa22.56■■□□□ 1.2
PDLIM2-216ENST00000464275 H0YHG0 523 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 M0QYT0 321 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 NR2C2P49116 596 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 CACNA2D1P54289 1103 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 HIF1AQ16665 826 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 OVOS1Q6IE37 1185 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 CPLX4Q7Z7G2 160 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 CDKL3Q8IVW4 592 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 PKMYT1Q99640 499 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 TMEM30AQ9NV96 361 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 PAK5Q9P286 719 aa22.55■■□□□ 1.2
PDLIM2-216ENST00000464275 GOLGA6L7A0A1B0GV03 622 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 CAPN9O14815 690 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 ZBED1O96006 694 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 DRD4P21917 467 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 DEUP1Q05D60 604 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 PDIA2Q13087 525 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 MAPRE1Q15691 268 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 RNF187Q5TA31 235 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 SYPL2Q5VXT5 272 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 ANKRD22Q5VYY1 191 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 GPRIN1Q7Z2K8 1008 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 URGCPQ8TCY9 931 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 LINC01599Q8WXQ3 324 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 SLC9A7Q96T83 725 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 FTHL17Q9BXU8 183 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 SEZ6LQ9BYH1 1024 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 RRN3Q9NYV6 651 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 PCDHB8Q9UN66 801 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 NAALADL1Q9UQQ1 740 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 USP3Q9Y6I4 520 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 COL4A4P53420 1690 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 PCNTO95613 3336 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 MYO16Q9Y6X6 1858 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 KBTBD13C9JR72 458 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 KCNN4O15554 427 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 FYNP06241 537 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 RABGGTBP53611 331 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 PITX1P78337 314 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 BASP1P80723 227 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 IRGQQ8WZA9 623 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 MAGEB5Q9BZ81 275 aa22.54■■□□□ 1.2
PDLIM2-216ENST00000464275 YJEFN3A6XGL0 299 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 E7ENQ6 273 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 LTFP02788 710 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 USP17L7P0C7H9 530 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 YY1P25490 414 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 RBL1P28749 1068 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 AIF1P55008 147 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 TSPY1Q01534 308 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 LACTB2Q53H82 288 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 NOMO2Q5JPE7 1267 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 C4orf22Q6V702 233 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 ZBED8Q8IZ13 594 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 SCML4Q8N228 414 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 LGALS13Q9UHV8 139 aa22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 XPO7Q9UIA9 1087 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-216ENST00000464275 E7ESA3 106 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 H3BRJ5 948 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 GOLGA8MH3BSY2 632 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 CHN1P15882 459 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 GOT1P17174 413 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 CLLU1OSQ5K130 101 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 LRRC8DQ7L1W4 858 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 PYROXD2Q8N2H3 581 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 RIBC1Q8N443 379 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 NSRP1Q9H0G5 558 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 DMAP1Q9NPF5 467 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 KANSL3Q9P2N6 904 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 ITGB1P05556 798 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 AMPD1P23109 780 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 BDNFP23560 247 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 VEGFBP49765 207 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 DSC1Q08554 894 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 NME3Q13232 169 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 FASTKD3Q14CZ7 662 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 SLC45A4Q5BKX6 768 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 NCBP2-AS2Q69YL0 99 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 ANKS4BQ8N8V4 417 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms