RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SYNCRIPO60506 623 aaKnown RBP16.16■□□□□ 0.18
SKA3-204ENST00000462482 STC2O76061 302 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 HMBSP08397 361 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
SKA3-204ENST00000462482 MXI1P50539 228 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 ZNF132P52740 706 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 ARID5AQ03989 594 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 EFEMP1Q12805 493 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 DPYDQ12882 1025 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 PPP1R26Q5T8A7 1209 aaPredicted RBP16.16■□□□□ 0.18
SKA3-204ENST00000462482 Q6ZNB5 142 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 KRBA2Q6ZNG9 492 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 TOGARAM2Q6ZUX3 1019 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 FBXL13Q8NEE6 735 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 ERLEC1Q96DZ1 483 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 ADAM33Q9BZ11 813 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 RAD54BQ9Y620 910 aa16.16■□□□□ 0.18
SKA3-204ENST00000462482 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 TMEM8BA6NDV4 472 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 UPK3BL1B0FP48 263 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 UPK3BL2E5RIL1 263 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 ARHGAP33O14559 1287 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 CISD3P0C7P0 127 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 CORO1AP31146 461 aaKnown RBP16.15■□□□□ 0.18
SKA3-204ENST00000462482 SIM1P81133 766 aaPredicted RBP16.15■□□□□ 0.18
SKA3-204ENST00000462482 HNRNPDQ14103 355 aaKnown RBP16.15■□□□□ 0.18
SKA3-204ENST00000462482 EDRF1Q3B7T1 1238 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 KIAA1211LQ6NV74 962 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 SCD5Q86SK9 330 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 MRGPRX1Q96LB2 322 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 TSG101Q99816 390 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 UBXN6Q9BZV1 441 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 CISHQ9NSE2 258 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 RAB20Q9NX57 234 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 MARCH2Q9P0N8 246 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 HCN2Q9UL51 889 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 SLC27A6Q9Y2P4 619 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 USP3Q9Y6I4 520 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 STON1Q9Y6Q2 735 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 ATG2BQ96BY7 2078 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 HELZP42694 1942 aaKnown RBP16.15■□□□□ 0.18
SKA3-204ENST00000462482 CHD8Q9HCK8 2581 aa16.15■□□□□ 0.18
SKA3-204ENST00000462482 SPAG17Q6Q759 2223 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 FAM237AA0A1B0GTK4 181 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 A0A1W2PQ27 194 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 A0A1W2PQ64 194 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 SLC12A8A0AV02 714 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 MEI4A8MW99 385 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 C1QTNF9BB2RNN3 333 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 H0Y626 953 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 TRIM16O95361 564 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 PENKP01210 267 aaPredicted RBP16.14■□□□□ 0.17
SKA3-204ENST00000462482 C1QTNF9P0C862 333 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 SPINK2P20155 84 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.17
SKA3-204ENST00000462482 SEMA3BQ13214 749 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 PLEKHG6Q3KR16 790 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 ANKS1BQ7Z6G8 1248 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 MINDY1Q8N5J2 469 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 SCNM1Q9BWG6 230 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 PRDM16Q9HAZ2 1276 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 CAPN10Q9HC96 672 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 RMND1Q9NWS8 449 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 HESX1Q9UBX0 185 aa16.14■□□□□ 0.17
SKA3-204ENST00000462482 CNOT1A5YKK6 2376 aaKnown RBP16.14■□□□□ 0.17
SKA3-204ENST00000462482 PTPRDP23468 1912 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 ACADMP11310 421 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 CD6P30203 668 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 MFAP3P55082 362 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 YWHAGP61981 247 aaKnown RBP eCLIP16.13■□□□□ 0.17
SKA3-204ENST00000462482 EIF4HQ15056 248 aaKnown RBP16.13■□□□□ 0.17
SKA3-204ENST00000462482 ARHGAP17Q68EM7 881 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 METTL3Q86U44 580 aaKnown RBP16.13■□□□□ 0.17
SKA3-204ENST00000462482 PIGZQ86VD9 579 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 DENND1CQ8IV53 801 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 ANKRD52Q8NB46 1076 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 DDI1Q8WTU0 396 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 RNF139Q8WU17 664 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 PLD4Q96BZ4 506 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 ZNF419Q96HQ0 510 aaPredicted RBP16.13■□□□□ 0.17
SKA3-204ENST00000462482 SLC2A11Q9BYW1 496 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 CIPCQ9C0C6 399 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 LRRC4Q9HBW1 653 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 FSCN3Q9NQT6 498 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 OLA1Q9NTK5 396 aaKnown RBP16.13■□□□□ 0.17
SKA3-204ENST00000462482 FBXO10Q9UK96 956 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
SKA3-204ENST00000462482 PCDHB9Q9Y5E1 797 aa16.13■□□□□ 0.17
SKA3-204ENST00000462482 KMT2BQ9UMN6 2715 aaPredicted RBP16.12■□□□□ 0.17
SKA3-204ENST00000462482 SPAARA0A1B0GVQ0 90 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 WASH3PC4AMC7 463 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 TIMM44O43615 452 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 ZNF202O95125 648 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 ZBED1O96006 694 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 KLKB1P03952 638 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 OXTRP30559 389 aa16.12■□□□□ 0.17
SKA3-204ENST00000462482 HARS2P49590 506 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms