RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 CENPHQ9H3R5 247 aa26.42■■□□□ 1.82
CDH23-208ENST00000461841 USP29Q9HBJ7 922 aa26.42■■□□□ 1.82
CDH23-208ENST00000461841 H7C0C1 242 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 HOXA2O43364 376 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 ATP5OP48047 213 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 SLC11A1P49279 550 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 NRLP54845 237 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 FAM171A1Q5VUB5 890 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 DCP1BQ8IZD4 617 aaKnown RBP26.41■■□□□ 1.82
CDH23-208ENST00000461841 MARCH5Q9NX47 278 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 RRN3Q9NYV6 651 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 RCOR3Q9P2K3 495 aaPredicted RBP26.41■■□□□ 1.82
CDH23-208ENST00000461841 TANC1Q9C0D5 1861 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 TNFRSF10BO14763 440 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 MAP3K6O95382 1288 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 PARNO95453 639 aaKnown RBP26.41■■□□□ 1.82
CDH23-208ENST00000461841 ZFXP17010 805 aaPredicted RBP26.41■■□□□ 1.82
CDH23-208ENST00000461841 KRT71Q3SY84 523 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 DEFB128Q7Z7B8 93 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 CEP57Q86XR8 500 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 RELL1Q8IUW5 271 aa26.41■■□□□ 1.82
CDH23-208ENST00000461841 FARP1Q9Y4F1 1045 aaPredicted RBP26.41■■□□□ 1.82
CDH23-208ENST00000461841 VWA8A3KMH1 1905 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 HMGB1P1B2RPK0 211 aaPredicted RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 TTC4O95801 387 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 AMPD1P23109 780 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 ADRA1BP35368 520 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 ARL4AP40617 200 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 CTCFP49711 727 aaPredicted RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 GBE1Q04446 702 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 SLC10A2Q12908 348 aaPredicted RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 MRPL58Q14197 206 aaKnown RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 UHMK1Q8TAS1 419 aaKnown RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 RBM15Q96T37 977 aaKnown RBP eCLIP26.4■■□□□ 1.82
CDH23-208ENST00000461841 COLEC11Q9BWP8 271 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 DDIT4Q9NX09 232 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 ABI2Q9NYB9 513 aaPredicted RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 SHOC2Q9UQ13 582 aa26.4■■□□□ 1.82
CDH23-208ENST00000461841 MKI67P46013 3256 aaKnown RBP26.4■■□□□ 1.82
CDH23-208ENST00000461841 SLC5A3P53794 718 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 KYNUQ16719 465 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 PCGF5Q86SE9 256 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 CPT1BQ92523 772 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 PRCCQ92733 491 aaPredicted RBP26.39■■□□□ 1.82
CDH23-208ENST00000461841 B3GALT6Q96L58 329 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 ANLNQ9NQW6 1124 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 ETNK2Q9NVF9 386 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 FBXW11Q9UKB1 542 aa26.39■■□□□ 1.82
CDH23-208ENST00000461841 TBKBP1A7MCY6 615 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 I6L893 689 aaPredicted RBP26.39■■□□□ 1.81
CDH23-208ENST00000461841 NDC80O14777 642 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 ACSL3O95573 720 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 NR2C2P49116 596 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 AIF1P55008 147 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 NFE2Q16621 373 aaPredicted RBP26.39■■□□□ 1.81
CDH23-208ENST00000461841 RNF139Q8WU17 664 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 NTAN1Q96AB6 310 aa26.39■■□□□ 1.81
CDH23-208ENST00000461841 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.39■■□□□ 1.81
CDH23-208ENST00000461841 PATJQ8NI35 1801 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 COL4A4P53420 1690 aaPredicted RBP26.38■■□□□ 1.81
CDH23-208ENST00000461841 BCLAF3A2AJT9 711 aaKnown RBP26.38■■□□□ 1.81
CDH23-208ENST00000461841 F9P00740 461 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 CTXN3Q4LDR2 81 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 EFHC2Q5JST6 749 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 C1orf53Q5VUE5 145 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 NCBP2-AS2Q69YL0 99 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 DIS3LQ8TF46 1054 aaKnown RBP26.38■■□□□ 1.81
CDH23-208ENST00000461841 FUBP3Q96I24 572 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDH23-208ENST00000461841 MRPL9Q9BYD2 267 aaKnown RBP26.38■■□□□ 1.81
CDH23-208ENST00000461841 ARHGEF4Q9NR80 690 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 AMHP03971 560 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 GALTP07902 379 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 FGFR3P22607 806 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 RBL1P28749 1068 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 PBX3P40426 434 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 SCAPQ12770 1279 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 SCN4BQ8IWT1 228 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 PPIL6Q8IXY8 311 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 RTP4Q96DX8 246 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 PKNOX2Q96KN3 472 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 PSD3Q9NYI0 1048 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 NINJ2Q9NZG7 142 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 MFHAS1Q9Y4C4 1052 aa26.38■■□□□ 1.81
CDH23-208ENST00000461841 NT5C1B-RDH14C9J2C7 533 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 KCNN4O15554 427 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 CEP128Q6ZU80 1094 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 BEND5Q7L4P6 421 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 TAB3Q8N5C8 712 aaPredicted RBP26.37■■□□□ 1.81
CDH23-208ENST00000461841 NAT8LQ8N9F0 302 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 TMEM109Q9BVC6 243 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 DTLQ9NZJ0 730 aa26.37■■□□□ 1.81
CDH23-208ENST00000461841 SF3B1O75533 1304 aaKnown RBP eCLIP26.37■■□□□ 1.81
CDH23-208ENST00000461841 CFAP69A5D8W1 941 aa26.36■■□□□ 1.81
CDH23-208ENST00000461841 IFRD2Q12894 506 aaPredicted RBP26.36■■□□□ 1.81
CDH23-208ENST00000461841 XRCC4Q13426 336 aa26.36■■□□□ 1.81
CDH23-208ENST00000461841 DNAJC21Q5F1R6 531 aaKnown RBP26.36■■□□□ 1.81
CDH23-208ENST00000461841 ANKRD22Q5VYY1 191 aa26.36■■□□□ 1.81
CDH23-208ENST00000461841 FUT10Q6P4F1 479 aa26.36■■□□□ 1.81
CDH23-208ENST00000461841 HOOK3Q86VS8 718 aa26.36■■□□□ 1.81
CDH23-208ENST00000461841 TMEM173Q86WV6 379 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms