RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 KIAA1841Q6NSI8 718 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 UNQ6494/PRO21346Q6UXR6 183 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 USP45Q70EL2 814 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CXXC5Q7LFL8 322 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 FBXO16Q8IX29 292 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 ZBTB34Q8NCN2 500 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CYP2W1Q8TAV3 490 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 ZNF503Q96F45 646 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 PDLIM2Q96JY6 352 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 LZTS2Q9BRK4 669 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 PRDM12Q9H4Q4 367 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 IFT122Q9HBG6 1241 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 UCKL1Q9NWZ5 548 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SEC63Q9UGP8 760 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 DPP7Q9UHL4 492 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 FBXO10Q9UK96 956 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 MUC6Q6W4X9 2439 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 MYH7BA7E2Y1 1941 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 ABCB11O95342 1321 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 MYADML2A6NDP7 307 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 A6NNZ2 444 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 KIF28PB7ZC32 967 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 IFRD1O00458 451 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 CREB3O43889 395 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 COQ9O75208 318 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 IPO7O95373 1038 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ARIH2O95376 493 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 CCL5P13501 91 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 AOAHP28039 575 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 RGS2P41220 211 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 NT5C2P49902 561 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ALDH5A1P51649 535 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 HSD17B4P51659 736 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ALDH6A1Q02252 535 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ROM1Q03395 351 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 DUSP8Q13202 625 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 TRIM25Q14258 630 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 MYBPC2Q14324 1141 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ANKRD1Q15327 319 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 LLGL1Q15334 1064 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC9C1Q4G0N8 1177 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 LRCH2Q5VUJ6 765 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 MBNL2Q5VZF2 373 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 KRT40Q6A162 431 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SLFN12LQ6IEE8 588 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 Q6ZSN1 163 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SEPT14Q6ZU15 432 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ARMCX2Q7L311 632 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 KANSL1Q7Z3B3 1105 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 POLNQ7Z5Q5 900 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SRGAP1Q7Z6B7 1085 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 C11orf96Q7Z7L8 435 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 LYSMD2Q8IV50 215 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SUGP1Q8IWZ8 645 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SDR16C5Q8N3Y7 309 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 PRR18Q8N4B5 295 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SNRNP27Q8WVK2 155 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ANKRD7Q92527 254 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 C1GALT1C1Q96EU7 318 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 DEFB118Q96PH6 123 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 RMDN3Q96TC7 470 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 FOXB1Q99853 325 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ELAC2Q9BQ52 826 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 SUDS3Q9H7L9 328 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 PSTPIP2Q9H939 334 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 BARHL2Q9NY43 387 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 ARHGAP28Q9P2N2 729 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 TAGLN3Q9UI15 199 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 MRPL11Q9Y3B7 192 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 NR2E3Q9Y5X4 410 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 KIAA1217Q5T5P2 1943 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 LRRC37A2A6NM11 1700 aa5.28□□□□□ -1.56
ATPAF1-203ENST00000460928 NCOR1O75376 2440 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 CCDC189A1A4V9 331 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 BTBD18B2RXH4 712 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 GCOM1H8Y6P7 765 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 TPP1O14773 563 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 PMM2O15305 246 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 DEXIO95424 95 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 ZBED1O96006 694 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 PFKMP08237 780 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 HOXC6P09630 235 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 POLR2MP0CAP2 368 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 RHCEP18577 417 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 HOXD10P28358 340 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 SMARCA1P28370 1054 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 GJB2P29033 226 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 CASQ1P31415 396 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 MC4RP32245 332 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 HTR3AP46098 478 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 ADCY7P51828 1080 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 RCAN1P53805 252 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 SLC16A1P53985 500 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 NLRP5P59047 1200 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 BEX3Q00994 111 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 AKAP17AQ02040 695 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 SP2Q02086 613 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 RHDQ02161 417 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms