RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RNF168Q8IYW5 571 aaPredicted RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 HIC2Q96JB3 615 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ZFP42Q96MM3 310 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 PHACTR1Q9C0D0 580 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 PHIPQ8WWQ0 1821 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 TREHO43280 583 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 XPOTO43592 962 aaKnown RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 SULT1E1P49888 294 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 CRADDP78560 199 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 CCDC142Q17RM4 750 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 MSS51Q4VC12 460 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 MROH9Q5TGP6 573 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 TAPT1Q6NXT6 567 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 RHBDF2Q6PJF5 856 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ANKRD23Q86SG2 305 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 VPS52Q8N1B4 723 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 DNAAF3Q8N9W5 541 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 BRI3BPQ8WY22 251 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ABTB1Q969K4 478 aaPredicted RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 UTP4Q969X6 686 aaKnown RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 FAM111AQ96PZ2 611 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 SNRNP25Q9BV90 132 aaKnown RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 LHX5Q9H2C1 402 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 PTPRHQ9HD43 1115 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 MARCOQ9UEW3 520 aaPredicted RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 PHTF1Q9UMS5 762 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 DRG1Q9Y295 367 aaKnown RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 MAGEA13PA6NCF6 341 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ITGAVP06756 1048 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 TROVE2P10155 538 aaKnown RBP eCLIP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ADRA1DP25100 572 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 EPHB2P29323 1055 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 CA9Q16790 459 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 KBTBD12Q3ZCT8 623 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF618Q5T7W0 954 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 SNX30Q5VWJ9 437 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 TLK2Q86UE8 772 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 CCDC97Q96F63 343 aaPredicted RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 ZMAT2Q96NC0 199 aaKnown RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 LRRC37BQ96QE4 947 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 PARK7Q99497 189 aaKnown RBP15.95■□□□□ 0.14
LMNB1-203ENST00000460265 SIK2Q9H0K1 926 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 KCNH4Q9UQ05 1017 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 SHOC2Q9UQ13 582 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 SMAPO00193 183 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 SNAI1O95863 264 aaPredicted RBP15.94■□□□□ 0.14
LMNB1-203ENST00000460265 MMP3P08254 477 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 SMIM10L2AP0DMW4 78 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 SMIM10L2BP0DMW5 78 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 ETS2P15036 469 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
LMNB1-203ENST00000460265 PDE1BQ01064 536 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 KLHL38Q2WGJ6 581 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 LGSNQ5TDP6 509 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 ARFGAP1Q8N6T3 406 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 SCG3Q8WXD2 468 aaKnown RBP15.94■□□□□ 0.14
LMNB1-203ENST00000460265 RILPQ96NA2 401 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 PHF24Q9UPV7 400 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 IQANK1A0A1B0GTG1 560 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 KPNA7A9QM74 516 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 COPEO14579 308 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 CYP2F1P24903 491 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 STIP1P31948 543 aaKnown RBP15.94■□□□□ 0.14
LMNB1-203ENST00000460265 RNASEH2BQ5TBB1 312 aaKnown RBP15.94■□□□□ 0.14
LMNB1-203ENST00000460265 FOXB2Q5VYV0 432 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 DTX3LQ8TDB6 740 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 TCP10LQ8TDR4 215 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 MAML1Q92585 1016 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 SLCO2A1Q92959 643 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 DCLRE1BQ9H816 532 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 PPME1Q9Y570 386 aa15.94■□□□□ 0.14
LMNB1-203ENST00000460265 TNPO2O14787 897 aaKnown RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 FAM189A1O60320 539 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 FAM155BO75949 473 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 MYCP01106 439 aaPredicted RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 GM2AP17900 193 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 USP46P62068 366 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 SLC6A3Q01959 620 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 ADIGQ0VDE8 80 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 MFSD5Q6N075 450 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 DENND5BQ6ZUT9 1274 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 PID1Q7Z2X4 250 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 MAML3Q96JK9 1138 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 PEBP4Q96S96 227 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 C16orf70Q9BSU1 422 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 CCDC134Q9H6E4 229 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 UBN1Q9NPG3 1134 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 AP4E1Q9UPM8 1137 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 CNTN6Q9UQ52 1028 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 DNAJC25-GNG10A0A024R161 153 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 TRIM49D1C9J1S8 452 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 I3L4J1 428 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 M0QYT0 321 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 STK10O94804 968 aaKnown RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 TMEM63AO94886 807 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 TFE3P19532 575 aaPredicted RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 RASSF2P50749 326 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 MAP3K7CLP57077 242 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 NR1H3Q13133 447 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms