RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NKIRAS1Q9NYS0 192 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 TTC3P53804 2025 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 E2F8A0AVK6 867 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 XPO1O14980 1071 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 DDHD2O94830 711 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 CHN1P15882 459 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ATP2A2P16615 1042 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 SAT1P21673 171 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 GPR15P49685 360 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ARL13BQ3SXY8 428 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 LRRC8DQ7L1W4 858 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 FBXO36Q8NEA4 188 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 FNIP1Q8TF40 1166 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 HNRNPABQ99729 332 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TKTL2Q9H0I9 626 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 NRDE2Q9H7Z3 1164 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TMLHEQ9NVH6 421 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 LOC285556D6RIA3 1793 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TCRBV5S1A1TA0A578 114 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ZBBXA8MT70 800 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ALDH2P05091 517 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 STX2P32856 288 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 LSP1P33241 339 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 PCK1P35558 622 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 RAB27AP51159 221 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 DRG2P55039 364 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 PTK7Q13308 1070 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ARHGAP17Q68EM7 881 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TAOK1Q7L7X3 1001 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 LRRTM3Q86VH5 581 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 CMASQ8NFW8 434 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 MYCBPAPQ8TBZ2 947 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 KCNN1Q92952 543 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ATXN7L3BQ96GX2 97 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TRIM56Q9BRZ2 755 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 STMN4Q9H169 189 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 LCMT1Q9UIC8 334 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 GGT7Q9UJ14 662 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 H3BRJ5 948 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 KIAA0754O94854 1291 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 CPP00450 1065 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 MDH1P40925 334 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 EFEMP1Q12805 493 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 UPP1Q16831 310 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 CES3Q6UWW8 571 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 FAM47EQ6ZV65 393 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 SYDE1Q6ZW31 735 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 SLC26A9Q7LBE3 791 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 VPS52Q8N1B4 723 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 MREGQ8N565 214 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 OR10T2Q8NGX3 314 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 CCHCR1Q8TD31 782 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 RSPH1Q8WYR4 309 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 UBXN6Q9BZV1 441 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 KLC2Q9H0B6 622 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 PCDH9Q9HC56 1237 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 PIGVQ9NUD9 493 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TMEM30AQ9NV96 361 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 TBC1D13Q9NVG8 400 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 ARID2Q68CP9 1835 aa9.7□□□□□ -0.86
NUDCD3-203ENST00000460110 H0YHG0 523 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 TRAPPC3O43617 180 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 CABYRO75952 493 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 CA4P22748 312 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 NOS2P35228 1153 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 GRIK3Q13003 919 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 PDK2Q15119 407 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 LRIG3Q6UXM1 1119 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 LRRC31Q6UY01 552 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 TRMT10CQ7L0Y3 403 aaKnown RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 TFAP2DQ7Z6R9 452 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 CSPG4P5Q96PW8 444 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 PRMT1Q99873 361 aaKnown RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 KIF9Q9HAQ2 790 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 DMAP1Q9NPF5 467 aaPredicted RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 PLXNA1Q9UIW2 1896 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 ATP9BO43861 1147 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 WARSP23381 471 aaKnown RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 ELK3P41970 407 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 MSH2P43246 934 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 CAV1Q03135 178 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 SLC20A2Q08357 652 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 EFTUD2Q15029 972 aaKnown RBP eCLIP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 PAQR9Q6ZVX9 377 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 PPIL6Q8IXY8 311 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 NIPA2Q8N8Q9 360 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 CCDC63Q8NA47 563 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 C12orf50Q8NA57 414 aaPredicted RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 AAASQ9NRG9 546 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 CDH9Q9ULB4 789 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 TBX18O95935 607 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 INHBAP08476 426 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 RPL9P32969 192 aaKnown RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 IFT88Q13099 833 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 BFSP2Q13515 415 aa9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 RTN4RL1Q86UN2 441 aaPredicted RBP9.69□□□□□ -0.86
NUDCD3-203ENST00000460110 TMEM86AQ8N2M4 240 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms