RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 LCLAT1Q6UWP7 414 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 TMTC1Q8IUR5 882 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 CPA6Q8N4T0 437 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 RMDN1Q96DB5 314 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 CYFIP2Q96F07 1278 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 HNRNPABQ99729 332 aaKnown RBP16.37■□□□□ 0.21
SDF4-204ENST00000459994 AGPAT1Q99943 283 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 P2RY13Q9BPV8 354 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 HAUS4Q9H6D7 363 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 PARD6AQ9NPB6 346 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 DMAP1Q9NPF5 467 aaPredicted RBP16.37■□□□□ 0.21
SDF4-204ENST00000459994 ARHGAP20Q9P2F6 1191 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 CYP17A1P05093 508 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 PTMAP06454 111 aaKnown RBP16.36■□□□□ 0.21
SDF4-204ENST00000459994 MBL2P11226 248 aaPredicted RBP16.36■□□□□ 0.21
SDF4-204ENST00000459994 CHRNB2P17787 502 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 TGM1P22735 817 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 GRSF1Q12849 480 aaKnown RBP eCLIP16.36■□□□□ 0.21
SDF4-204ENST00000459994 TDRD12Q587J7 1177 aaKnown RBP16.36■□□□□ 0.21
SDF4-204ENST00000459994 CLEC20AQ6ZU45 233 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 ZNF571Q7Z3V5 609 aaPredicted RBP16.36■□□□□ 0.21
SDF4-204ENST00000459994 C12orf40Q86WS4 652 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 LRRC8AQ8IWT6 810 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 CD101Q93033 1021 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 ATP2A3Q93084 1043 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 SLITRK1Q96PX8 696 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 CHP1Q99653 195 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 FAM126AQ9BYI3 521 aaPredicted RBP16.36■□□□□ 0.21
SDF4-204ENST00000459994 CSNK1G1Q9HCP0 422 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 OSER1Q9NX31 292 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 CFAP97Q9P2B7 532 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 NCDNQ9UBB6 729 aa16.36■□□□□ 0.21
SDF4-204ENST00000459994 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.36■□□□□ 0.21
SDF4-204ENST00000459994 FAM92AA1XBS5 289 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 RTN3O95197 1032 aaPredicted RBP16.35■□□□□ 0.21
SDF4-204ENST00000459994 CALCAP01258 141 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 ZDHHC11BP0C7U3 371 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 TNFAIP3P21580 790 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
SDF4-204ENST00000459994 SLC6A11P48066 632 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 FMO1Q01740 532 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 PPP1R26Q5T8A7 1209 aaPredicted RBP16.35■□□□□ 0.21
SDF4-204ENST00000459994 TRIM72Q6ZMU5 477 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 VPS36Q86VN1 386 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 TMEM139Q8IV31 216 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 ADGRG2Q8IZP9 1017 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 SYNPOQ8N3V7 929 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 ANKRD52Q8NB46 1076 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 RPLP0P6Q8NHW5 317 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 OLIG1Q8TAK6 271 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 SLC20A1Q8WUM9 679 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 BAG1Q99933 345 aaPredicted RBP16.35■□□□□ 0.21
SDF4-204ENST00000459994 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 NUP205Q92621 2012 aa16.35■□□□□ 0.21
SDF4-204ENST00000459994 TBX18O95935 607 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 MMEP08473 750 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 PLEKP08567 350 aaPredicted RBP16.34■□□□□ 0.21
SDF4-204ENST00000459994 PFKLP17858 780 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 ID4P47928 161 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 PPP3CCP48454 512 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 NRLP54845 237 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
SDF4-204ENST00000459994 PKDCCQ504Y2 493 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 TAF3Q5VWG9 929 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 SNX30Q5VWJ9 437 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 LONP2Q86WA8 852 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 SLC30A5Q8TAD4 765 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 CCDC42Q96M95 316 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 HHIPQ96QV1 700 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 NHEJ1Q9H9Q4 299 aaPredicted RBP16.34■□□□□ 0.21
SDF4-204ENST00000459994 NMUR1Q9HB89 426 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 EHD2Q9NZN4 543 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 HESX1Q9UBX0 185 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 CEP192Q8TEP8 1941 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 THADAQ6YHU6 1953 aa16.34■□□□□ 0.21
SDF4-204ENST00000459994 K7EQS6 105 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 MDM4O15151 490 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 NRDCO43847 1150 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 LSM8O95777 96 aaKnown RBP16.33■□□□□ 0.2
SDF4-204ENST00000459994 CYP1A1P04798 512 aaPredicted RBP16.33■□□□□ 0.2
SDF4-204ENST00000459994 SETSIPP0DME0 302 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 IRF1P10914 325 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
SDF4-204ENST00000459994 DRD1P21728 446 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
SDF4-204ENST00000459994 SEC13P55735 322 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.2
SDF4-204ENST00000459994 PPP2R5DQ14738 602 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 DHCR24Q15392 516 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 GOLGA7BQ2TAP0 167 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 WDR5BQ86VZ2 330 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 OVCA2Q8WZ82 227 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms