RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TAS2R40P59535 323 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 ATP13A4Q4VNC1 1196 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 AADACL2Q6P093 401 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 RNF10Q8N5U6 811 aaKnown RBP10.78□□□□□ -0.68
USP39-210ENST00000459775 TRIM11Q96F44 468 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 C11orf84Q9BUA3 381 aaPredicted RBP10.78□□□□□ -0.68
USP39-210ENST00000459775 TLR10Q9BXR5 811 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 NMUR1Q9HB89 426 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 RXFP1Q9HBX9 757 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 KLHL11Q9NVR0 708 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 SMARCAL1Q9NZC9 954 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 UVRAGQ9P2Y5 699 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 AFF4Q9UHB7 1163 aaKnown RBP10.78□□□□□ -0.68
USP39-210ENST00000459775 STRIP2Q9ULQ0 834 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 C2CD4BA6NLJ0 364 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 H3BNC9 293 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 NRG2O14511 850 aaPredicted RBP10.77□□□□□ -0.69
USP39-210ENST00000459775 IMPDH2P12268 514 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 TSPAN7P41732 249 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 TWF1Q12792 350 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 CCDC14Q49A88 953 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 SCD5Q86SK9 330 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 NT5DC3Q86UY8 548 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 SPPL2BQ8TCT7 592 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 SLC22A17Q8WUG5 538 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP39-210ENST00000459775 PLVAPQ9BX97 442 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 MRPL47Q9HD33 250 aaKnown RBP10.77□□□□□ -0.69
USP39-210ENST00000459775 ABCB6Q9NP58 842 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 TMPRSS4Q9NRS4 437 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 POLG2Q9UHN1 485 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 ATP8B3O60423 1300 aa10.77□□□□□ -0.69
USP39-210ENST00000459775 MYH10P35580 1976 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 A0A1W2PQH9 124 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 RFPL2O75678 378 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 TBX18O95935 607 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 EPCAMP16422 314 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 PSMA2P25787 234 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 MAGEA11P43364 429 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 ACADSBP45954 432 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 EIF2B5Q13144 721 aaKnown RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 RNF187Q5TA31 235 aaPredicted RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 VSTM1Q6UX27 236 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 PEX26Q7Z412 305 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 SLFN11Q7Z7L1 901 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 CHPFQ8IZ52 775 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 NUP93Q8N1F7 819 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 TXLNBQ8N3L3 684 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 MSANTD4Q8NCY6 345 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 COG1Q8WTW3 980 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 ALG3Q92685 438 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 HLA-CQ95604 372 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 C8orf48Q96LL4 319 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 LMCD1Q9NZU5 365 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 CWC15Q9P013 229 aaKnown RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 GMIPQ9P107 970 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 PCSK1NQ9UHG2 260 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 YIPF1Q9Y548 306 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 USP3Q9Y6I4 520 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 SLC38A8A6NNN8 435 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 MDM4O15151 490 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 SPOPO43791 374 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 URI1O94763 535 aaPredicted RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 PROSCO94903 275 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 HADHBP55084 474 aaKnown RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 YWHAZP63104 245 aaKnown RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 ADCY2Q08462 1091 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 TAF10Q12962 218 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 ZNF211Q13398 564 aaPredicted RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 SMC1AQ14683 1233 aaKnown RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 KCNT1Q5JUK3 1230 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 MEI1Q5TIA1 1274 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 OTUD1Q5VV17 481 aaPredicted RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 BSPRYQ5W0U4 402 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 SMYD5Q6GMV2 418 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 LILRA6Q6PI73 481 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 DENND5BQ6ZUT9 1274 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 SLC26A9Q7LBE3 791 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 MS4A14Q96JA4 679 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 NECAB3Q96P71 396 aaPredicted RBP10.76□□□□□ -0.69
USP39-210ENST00000459775 ALS2CR12Q96Q35 445 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 FNIP2Q9P278 1114 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 WDR35Q9P2L0 1181 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
USP39-210ENST00000459775 TTC28Q96AY4 2481 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 FAM25EA8MYX2 175 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 PI4K2BG5E9Z4 385 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 FSCN2O14926 492 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 LPXNO60711 386 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 RB1P06400 928 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 NCAM1P13591 858 aa10.75□□□□□ -0.69
USP39-210ENST00000459775 GPD1P21695 349 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms