RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	IL4R	P24394	825 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	CTNNB1	P35222	781 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	TAF10	Q12962	218 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	BRD3	Q15059	726 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	CCNG2	Q16589	344 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	ANKRD20A8P	Q5CZ79	823 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	BEND5	Q7L4P6	421 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	FAM71B	Q8TC56	605 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	CASKIN2	Q8WXE0	1202 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	CCDC114	Q96M63	670 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	MAK16	Q9BXY0	300 aa	Known RBP	15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	TRIM31	Q9BZY9	425 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	CYP4F11	Q9HBI6	524 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	GDF3	Q9NR23	364 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	SFMBT1	Q9UHJ3	866 aa		15.2	■□□□□ 0.02
C1orf228-218	ENST00000458657	FAM92A	A1XBS5	289 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657		I6L893	689 aa	Predicted RBP	15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	TEX28	O15482	410 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	MSI1	O43347	362 aa	Known RBP	15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	SEC31A	O94979	1220 aa	Known RBP	15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	TUBB	P07437	444 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	CTSA	P10619	480 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	MYOG	P15173	224 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	MCM3	P25205	808 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	TUFM	P49411	452 aa	Known RBP	15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	RAB33A	Q14088	237 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	C9orf50	Q5SZB4	431 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	TPGS2	Q68CL5	300 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	SND1	Q7KZF4	910 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	SPRED2	Q7Z698	418 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	IFT20	Q8IY31	132 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	IFT81	Q8WYA0	676 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	RUBCN	Q92622	972 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	CASP10	Q92851	521 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	RNF157	Q96PX1	679 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	ZNF670	Q9BS34	389 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	DPH5	Q9H2P9	285 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	SMOC2	Q9H3U7	446 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	HOMER3	Q9NSC5	361 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	DNPEP	Q9ULA0	475 aa		15.19	■□□□□ 0.02
C1orf228-218	ENST00000458657	LIAS	O43766	372 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	LILRB3	O75022	631 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ECEL1	O95672	775 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	F9	P00740	461 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	IGLV3-25	P01717	112 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	PECAM1	P16284	738 aa	Predicted RBP	15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ADRA1B	P35368	520 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	CARS	P49589	748 aa	Known RBP	15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	CXCR3	P49682	368 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	OTUD4	Q01804	1114 aa	Known RBP	15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	EFHC2	Q5JST6	749 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	RASIP1	Q5U651	963 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	NPNT	Q6UXI9	565 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	DDX42	Q86XP3	938 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ARHGAP18	Q8N392	663 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	PQLC3	Q8N755	202 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	PCDH19	Q8TAB3	1148 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ACTL9	Q8TC94	416 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	RNF139	Q8WU17	664 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	RNF34	Q969K3	372 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ABHD8	Q96I13	439 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	RUNDC3B	Q96NL0	473 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	WDCP	Q9H6R7	721 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ALG13	Q9NP73	1137 aa	Known RBP	15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	FBXW11	Q9UKB1	542 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	UTP11	Q9Y3A2	253 aa	Known RBP	15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	YIPF1	Q9Y548	306 aa		15.18	■□□□□ 0.02
C1orf228-218	ENST00000458657	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	LINC01553	A4QN01	128 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	FAM187A	A6NFU0	413 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	GRXCR1	A8MXD5	290 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	PRRG1	O14668	218 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	IRAK2	O43187	625 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	ARHGEF15	O94989	841 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	CNP	P09543	421 aa	Known RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	GOT1	P17174	413 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	GBP1	P32455	592 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	BMPR1A	P36894	532 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	BYSL	Q13895	437 aa	Known RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	TFDP2	Q14188	446 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	FAM109B	Q6ICB4	259 aa	Predicted RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	CCNI2	Q6ZMN8	369 aa	Predicted RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	TMC7	Q7Z402	723 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	PSTK	Q8IV42	348 aa	Known RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	NTAN1	Q96AB6	310 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	FAF2	Q96CS3	445 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	CSPG4P5	Q96PW8	444 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	C17orf80	Q9BSJ5	609 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	TKTL2	Q9H0I9	626 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	TLR8	Q9NR97	1041 aa	Known RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	CWC15	Q9P013	229 aa	Known RBP	15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	FNIP2	Q9P278	1114 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	RASAL2	Q9UJF2	1139 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	APOC4-APOC2	K7ER74	178 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	DAPK3	O43293	454 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	CREB3	O43889	395 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	ERLIN1	O75477	346 aa		15.17	■□□□□ 0.02
C1orf228-218	ENST00000458657	APOC2	P02655	101 aa		15.17	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms