RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	MSTO1	Q9BUK6	570 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	CDT1	Q9H211	546 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	FZD8	Q9H461	694 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	ST6GALNAC4	Q9H4F1	302 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	PCIF1	Q9H4Z3	704 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	TMEM206	Q9H813	350 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	IL23A	Q9NPF7	189 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	AGPAT3	Q9NRZ7	376 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	TYW1	Q9NV66	732 aa	Known RBP	5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	INPP5F	Q9Y2H2	1132 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	HES2	Q9Y543	173 aa		5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.06	□□□□□ -1.6
COL21A1-204	ENST00000456983	LAMA3	Q16787	3333 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TRIOBP	Q9H2D6	2365 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TSC2	P49815	1807 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	BICDL2	A1A5D9	508 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	ANKRD63	C9JTQ0	380 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	CLDN3	O15551	220 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TOM1L1	O75674	476 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	RECQL4	O94761	1208 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	PARN	O95453	639 aa	Known RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	PIGR	P01833	764 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	CXCL10	P02778	98 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	PFKM	P08237	780 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	CXCL8	P10145	99 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	FGFR1	P11362	822 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	ACTN1	P12814	892 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TGM1	P22735	817 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	NR2F2	P24468	414 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	AKAP5	P24588	427 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	AXL	P30530	894 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	HOXA11	P31270	313 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	MLH1	P40692	756 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TNFSF9	P41273	254 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	ACOT2	P49753	483 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	GATM	P50440	423 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	WDR5	P61964	334 aa	Known RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	POU5F1B	Q06416	359 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	MCL1	Q07820	350 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	COL9A2	Q14055	689 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TPD52L1	Q16890	204 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	PAN2	Q504Q3	1202 aa	Known RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	USP39	Q53GS9	565 aa	Known RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	GLRA4	Q5JXX5	417 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	ZNF365	Q70YC5	407 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	HACE1	Q8IYU2	909 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	ZSWIM2	Q8NEG5	633 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	GOLGA5	Q8TBA6	731 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	P2RX5	Q93086	422 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	CCDC51	Q96ER9	411 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	RPS6KC1	Q96S38	1066 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	MCMBP	Q9BTE3	642 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	CCDC94	Q9BW85	323 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	STRA6	Q9BX79	667 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	FTHL17	Q9BXU8	183 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	GTPBP4	Q9BZE4	634 aa	Known RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	HAPLN2	Q9GZV7	340 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	KLHL25	Q9H0H3	589 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	KCTD10	Q9H3F6	313 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TSPY26P	Q9H489	355 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	MMRN2	Q9H8L6	949 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	ANO10	Q9NW15	660 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	RBAK	Q9NYW8	714 aa	Predicted RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	HSPBP1	Q9NZL4	362 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	KCNG1	Q9UIX4	513 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	AGO2	Q9UKV8	859 aa	Known RBP	5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TNFSF13B	Q9Y275	285 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	IPP	Q9Y573	584 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	PCDHB2	Q9Y5E7	798 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983	TTC3	P53804	2025 aa		5.05	□□□□□ -1.6
COL21A1-204	ENST00000456983		A0A0B4J269	797 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	OGT	O15294	1046 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	TGFB1I1	O43294	461 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	EXOC3	O60645	756 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	BAIAP3	O94812	1187 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CSPG5	O95196	566 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	LETM1	O95202	739 aa	Predicted RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ADRB2	P07550	413 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	TRIM49	P0CI25	452 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	TRIM49C	P0CI26	452 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	MCF2	P10911	925 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	EPB41	P11171	864 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ATF7	P17544	494 aa	Predicted RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SCP2	P22307	547 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	PROZ	P22891	400 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CCNE1	P24864	410 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	ADSS	P30520	456 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	PPP1R2	P41236	205 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	RAB27A	P51159	221 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	MYL5	Q02045	173 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	LRRC63	Q05C16	580 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SPAG1	Q07617	926 aa		5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	SNRNP35	Q16560	246 aa	Known RBP	5.04	□□□□□ -1.6
COL21A1-204	ENST00000456983	CCDC40	Q4G0X9	1142 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms