RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CYTH1Q15438 398 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 VPS72Q15906 364 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 NHSL2Q5HYW2 709 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC27A3Q5K4L6 730 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TRAF7Q6Q0C0 670 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 RPS27LQ71UM5 84 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TP53INP2Q8IXH6 220 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ANKRD35Q8N283 1001 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PQLC1Q8N2U9 271 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CENPSQ8N2Z9 138 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PIP4K2CQ8TBX8 421 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SH3RF2Q8TEC5 729 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CPB2Q96IY4 423 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 MARK4Q96L34 752 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CNBD2Q96M20 576 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CAMKK2Q96RR4 588 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 WRNIP1Q96S55 665 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CIB1Q99828 191 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 GPATCH1Q9BRR8 931 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 HAUS8Q9BT25 410 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 INO80BQ9C086 356 aaPredicted RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TLR9Q9NR96 1032 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TYW1Q9NV66 732 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 MTRF1LQ9UGC7 380 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 DDX25Q9UHL0 483 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 RASAL2Q9UJF2 1139 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 HEATR5BQ9P2D3 2071 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 GOLGA8QA0A0J9YX86 632 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 GOLGA8OA6NCC3 632 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 GOLGA8NF8WBI6 632 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 AP3D1O14617 1153 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SSX4O60224 188 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DCTN3O75935 186 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 GH2P01242 217 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MT-ND1P03886 318 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SRGAP2CP0DJJ0 459 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SRGAP2BP0DMP2 458 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 L1CAMP32004 1257 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CA8P35219 290 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MMRN1Q13201 1228 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SETDB1Q15047 1291 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ERFEQ4G0M1 354 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PRR16Q569H4 304 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SPDYAQ5MJ70 313 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CATSPEREQ5SY80 951 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CIAPIN1Q6FI81 312 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DHRS4L2Q6PKH6 230 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MAMDC4Q6UXC1 1216 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PPFIBP2Q8ND30 876 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DQX1Q8TE96 717 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 NECTIN4Q96NY8 510 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CATSPER2Q96P56 530 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RTFDC1Q9BY42 306 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CRNKL1Q9BZJ0 848 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PAIP1Q9H074 479 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SEMA6AQ9H2E6 1030 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SH3GLB2Q9NR46 395 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SCAF8Q9UPN6 1271 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ESYT2A0FGR8 921 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ARHGAP10A1A4S6 786 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PRORSD1PA6NEY8 169 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TRIM64A6NGJ6 449 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 KBTBD13C9JR72 458 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RFXAPO00287 272 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 LAD1O00515 517 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DENRO43583 198 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SORBS3O60504 671 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DKC1O60832 514 aaKnown RBP eCLIP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CYP1A2P05177 515 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 FGF3P11487 239 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ITGB5P18084 799 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TCN1P20061 433 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 UGT1A4P22310 534 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 HOXA10P31260 410 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 UGT1A3P35503 534 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 UGT1A5P35504 534 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 NR4A2P43354 598 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TUFMP49411 452 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 NCKAP1LP55160 1127 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DYNC1I2Q13409 638 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TCEAL1Q15170 157 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SF3B3Q15393 1217 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 QRICH1Q2TAL8 776 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ANO4Q32M45 955 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM214AQ32MH5 1076 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TRMT5Q32P41 509 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 IL23RQ5VWK5 629 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 LAIR1Q6GTX8 287 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 FBXO36Q8NEA4 188 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SNF8Q96H20 258 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PLEKHA8Q96JA3 519 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP1R36Q96LQ0 422 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RHNO1Q9BSD3 238 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 HGH1Q9BTY7 390 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 HAPLN2Q9GZV7 340 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SOX13Q9UN79 622 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MROH5Q6ZUA9 1318 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF541Q9H0D2 1346 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 KRBA1A5PL33 1030 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms