RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 FSCBQ5H9T9 825 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 MBLAC2Q68D91 279 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 TIFABQ6ZNK6 161 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 RSPH3Q86UC2 560 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 ADGRF2Q8IZF7 708 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 AHI1Q8N157 1196 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 GSDMBQ8TAX9 411 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 ATP2A3Q93084 1043 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 PPP1R14BQ96C90 147 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
PTPRE-204ENST00000455661 GRIP2Q9C0E4 1043 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 XPNPEP1Q9NQW7 623 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
PTPRE-204ENST00000455661 MAP3K20Q9NYL2 800 aaKnown RBP14.18□□□□□ -0.14
PTPRE-204ENST00000455661 KAT6AQ92794 2004 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 KCNN4O15554 427 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 DNAJA2O60884 412 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 TRUB2O95900 331 aaKnown RBP14.17□□□□□ -0.14
PTPRE-204ENST00000455661 ASS1P00966 412 aaKnown RBP14.17□□□□□ -0.14
PTPRE-204ENST00000455661 PRDX6P30041 224 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 MIPP30301 263 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 CAP2P40123 477 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 PTGER2P43116 358 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 MTTPP55157 894 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 ADARP55265 1226 aaKnown RBP14.17□□□□□ -0.14
PTPRE-204ENST00000455661 RPL10AP62906 217 aaKnown RBP14.17□□□□□ -0.14
PTPRE-204ENST00000455661 KRT81Q14533 505 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 UNC5AQ6ZN44 842 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 KIAA0319LQ8IZA0 1049 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 ZNF778Q96MU6 729 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 MMP19Q99542 508 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 USP18Q9UMW8 372 aa14.17□□□□□ -0.14
PTPRE-204ENST00000455661 A0A0J9YVX5 310 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SLC15A5A6NIM6 579 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 FAM159BA6NKW6 160 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 K7ERI5 159 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 POLRMTO00411 1230 aaKnown RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 GLRA3O75311 464 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SERPINE1P05121 402 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 APRTP07741 180 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SRGAP2CP0DJJ0 459 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SRGAP2BP0DMP2 458 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ATP6V1B1P15313 513 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 GRK2P25098 689 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ACAP1Q15027 740 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 PTPN20Q4JDL3 420 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ZBTB41Q5SVQ8 909 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 CAND1Q86VP6 1230 aaKnown RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SEPT12Q8IYM1 358 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 EMC1Q8N766 993 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ZFP28Q8NHY6 868 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 DEPTORQ8TB45 409 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 TFAP2BQ92481 460 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SERPINI1Q99574 410 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 NIF3L1Q9GZT8 377 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 HAPLN2Q9GZV7 340 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ZNF696Q9H7X3 374 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 TMOD2Q9NZR1 351 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 BCAP29Q9UHQ4 241 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 COL2A1P02458 1487 aaPredicted RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 CNTNAP2Q9UHC6 1331 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 MED7O43513 233 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 CST3P01034 146 aaPredicted RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 PSAPP07602 524 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 COX4I1P13073 169 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 TPP2P29144 1249 aaPredicted RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 CDH6P55285 790 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 GHRHRQ02643 423 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 DCTN2Q13561 401 aaKnown RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 TAF5Q15542 800 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ADRM1Q16186 407 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 DENND1BQ6P3S1 775 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 TMEM126BQ8IUX1 230 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 METTL25Q8N6Q8 603 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 EFCAB3Q8N7B9 438 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ACMSDQ8TDX5 336 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 TFB1MQ8WVM0 346 aaKnown RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 CLMNQ96JQ2 1002 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 CNBD2Q96M20 576 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 RMDN3Q96TC7 470 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 UBAP1Q9NZ09 502 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
PTPRE-204ENST00000455661 AP4B1Q9Y6B7 739 aa14.16□□□□□ -0.14
PTPRE-204ENST00000455661 HMX2A2RU54 273 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 CRTAMO95727 393 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 PIGRP01833 764 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 FAM58BPP0C7Q3 252 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 CD19P15391 556 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 NPR1P16066 1061 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 HSPA13P48723 471 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 SERPINB8P50452 374 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 CNTN2Q02246 1040 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 SFSWAPQ12872 951 aaKnown RBP14.15□□□□□ -0.14
PTPRE-204ENST00000455661 MMRN1Q13201 1228 aa14.15□□□□□ -0.14
PTPRE-204ENST00000455661 MYLK3Q32MK0 819 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms