RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 GRIK1P39086 918 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 CACNA2D1P54289 1103 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 IFT88Q13099 833 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 C10orf67Q8IYJ2 551 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 SMARCD1Q96GM5 515 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 CDH9Q9ULB4 789 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 ZNF236Q9UL36 1845 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 H3BRJ5 948 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 ITGB1P05556 798 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 TUSC3Q13454 348 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 EFTUD2Q15029 972 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■■■■□ 21.9
CLK3-203ENST00000454830 UPP1Q16831 310 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 CABS1Q96KC9 395 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 TMEM209Q96SK2 561 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 LGMNQ99538 433 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 FERMT1Q9BQL6 677 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 NUDT5Q9UKK9 219 aa14.17□□□□□ -0.14
CLK3-203ENST00000454830 EEF2KO00418 725 aaKnown RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 ZFXP17010 805 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 ELK3P41970 407 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 PTK7Q13308 1070 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 PPP1R21Q6ZMI0 780 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 FBF1Q8TES7 1133 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 PIH1D1Q9NWS0 290 aaKnown RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 ABI2Q9NYB9 513 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 GOLGA8RI6L899 631 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 HGSO14964 777 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 FAM107AO95990 144 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 LTFP02788 710 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 MMP13P45452 471 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 MGAT3Q09327 533 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 TAZQ16635 292 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 SMYD5Q6GMV2 418 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 SPATA2LQ8IUW3 424 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 RNF139Q8WU17 664 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 CHMP6Q96FZ7 201 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 KLF6Q99612 283 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 TMEM109Q9BVC6 243 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 MAGED2Q9UNF1 606 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 TTLL3Q9Y4R7 772 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 GABRDO14764 452 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 ALOX15BO15296 676 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 DAB1O75553 588 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 INHAP05111 366 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 NEFHP12036 1026 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 MSH2P43246 934 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 MICALCLQ6ZW33 695 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 STRADAQ7RTN6 431 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 KLHDC9Q8NEP7 349 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 KIF9Q9HAQ2 790 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
CLK3-203ENST00000454830 PIGVQ9NUD9 493 aa14.16□□□□□ -0.14
CLK3-203ENST00000454830 TRAPPC3O43617 180 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 RPLP2P05387 115 aaKnown RBP14.15□□□□□ -0.14
CLK3-203ENST00000454830 GRIK3Q13003 919 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 RWDD4Q6NW29 188 aaKnown RBP14.15□□□□□ -0.14
CLK3-203ENST00000454830 DENND5BQ6ZUT9 1274 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 ECHDC2Q86YB7 292 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 NAT8LQ8N9F0 302 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 STKLD1Q8NE28 680 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 SCN10AQ9Y5Y9 1956 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 CFAP69A5D8W1 941 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 STK10O94804 968 aaKnown RBP14.15□□□□□ -0.14
CLK3-203ENST00000454830 ENDOD1O94919 500 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 SRGAP2BP0DMP2 458 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 CKBP12277 381 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 TPI1P60174 286 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 PKN2Q16513 984 aaKnown RBP14.15□□□□□ -0.14
CLK3-203ENST00000454830 DPYSL2Q16555 572 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 GKAP1Q5VSY0 366 aaPredicted RBP14.15□□□□□ -0.14
CLK3-203ENST00000454830 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 SMC6Q96SB8 1091 aa14.15□□□□□ -0.14
CLK3-203ENST00000454830 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 CPP00450 1065 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 CA4P22748 312 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 DAOAP59103 153 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 HTRA3P83110 453 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 YWHAHQ04917 246 aaPredicted RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 CACNA2D3Q8IZS8 1091 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 URGCPQ8TCY9 931 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 TFB1MQ8WVM0 346 aaKnown RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 PGLYRP2Q96PD5 576 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 ELAC2Q9BQ52 826 aaKnown RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 TRABDQ9H4I3 376 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 CYLDQ9NQC7 956 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 TMEM30AQ9NV96 361 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 SNX10Q9Y5X0 201 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 KIF3CO14782 793 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 FBXO21O94952 628 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 SLC10A2Q12908 348 aaPredicted RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 QPCTQ16769 361 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 ARL13BQ3SXY8 428 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 SDHAF4Q5VUM1 108 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 ZNF280BQ86YH2 543 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 SAMD15Q9P1V8 674 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms