RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 TPSAB1Q15661 275 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 ZRSR2Q15696 482 aaKnown RBP10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 BBS9Q3SYG4 887 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 SEZ6Q53EL9 994 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 STXBP5Q5T5C0 1151 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 FAM102AQ5T9C2 384 aaPredicted RBP10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 ATG16L1Q676U5 607 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 DARS2Q6PI48 645 aaKnown RBP10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 CXCL17Q6UXB2 119 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 BZW1Q7L1Q6 419 aaKnown RBP10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 ARFGAP1Q8N6T3 406 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 TCP10LQ8TDR4 215 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 FAF2Q96CS3 445 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 TSSK1BQ9BXA7 367 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 SDCBP2Q9H190 292 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 PRDM12Q9H4Q4 367 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 FAM96AQ9H5X1 160 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 RNPEPL1Q9HAU8 725 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 NXF1Q9UBU9 619 aaKnown RBP10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 SIX4Q9UIU6 781 aa10.98□□□□□ -0.65
GTF3C2-206ENST00000454704 CHD7Q9P2D1 2997 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 A0A1W2PPM1 405 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 APOL1O14791 398 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 KRT38O76015 456 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 HAUS5O94927 633 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CD4P01730 458 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 KRT19P08727 400 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SNRPAP09012 282 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 STAG3L1P0CL83 205 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CXCL8P10145 99 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CALB2P22676 271 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 PRKCHP24723 683 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 MARK3P27448 753 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SSTR1P30872 391 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SSTR3P32745 418 aaPredicted RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 GCKP35557 465 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 ETV4P43268 484 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 NR2C2P49116 596 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 ARFIP2P53365 341 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 GDF10P55107 478 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CDH6P55285 790 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 DYNLT1P63172 113 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 BASP1P80723 227 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SARNPP82979 210 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CDK16Q00536 496 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CDC42EP1Q00587 391 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 KRT81Q14533 505 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 TMEM132DQ14C87 1099 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 DCAF4L1Q3SXM0 396 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 FNBP1LQ5T0N5 605 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 ANKRD22Q5VYY1 191 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SLC9A4Q6AI14 798 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CCDC62Q6P9F0 684 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 PRUNE1Q86TP1 453 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SESTD1Q86VW0 696 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 UNC93AQ86WB7 457 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CCNJLQ8IV13 435 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 ANKMY2Q8IV38 441 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 UNC45BQ8IWX7 931 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 LINC01465Q8N7H1 131 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 TBC1D31Q96DN5 1066 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 SPATA33Q96N06 139 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 C7orf26Q96N11 449 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 GAS2L1Q99501 681 aaPredicted RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CALN1Q9BXU9 219 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 ELOVL4Q9GZR5 314 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 IQCGQ9H095 443 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 PLEKHA5Q9HAU0 1116 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 XAB2Q9HCS7 855 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CXXC1Q9P0U4 656 aaPredicted RBP10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 GTF2IRD1Q9UHL9 959 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 CYTH4Q9UIA0 394 aa10.97□□□□□ -0.65
GTF3C2-206ENST00000454704 TCRBV9S1A1TA0A576 114 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 LACTBL1A8MY62 500 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 HACD1B0YJ81 288 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 H7C0C1 242 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 I3L4J1 428 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 BIRC5O15392 142 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 C22orf31O95567 290 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 ITGB3P05106 788 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 MLNP12872 115 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 ADRA1DP25100 572 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 ELK3P41970 407 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 PTPN9P43378 593 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 ATP5OP48047 213 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 CLNS1AP54105 237 aaKnown RBP10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 NKX3-2P78367 333 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 LAMC2Q13753 1193 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 PRKD1Q15139 912 aaPredicted RBP10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 FSCN1Q16658 493 aaKnown RBP10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 SMTNL2Q2TAL5 461 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 EEF1DP3Q658K8 133 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 ZNF449Q6P9G9 518 aa10.96□□□□□ -0.65
GTF3C2-206ENST00000454704 CLNKQ7Z7G1 428 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms