RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 WASP42768 502 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 DGKGP49619 791 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 ZNF132P52740 706 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 DAOAP59103 153 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 STILQ15468 1287 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 ELF2Q15723 593 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 CCDC6Q16204 474 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 USP39Q53GS9 565 aaKnown RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 EGFLAMQ63HQ2 1017 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 PMF1Q6P1K2 205 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 PRR23CQ6ZRP0 262 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 TOGARAM2Q6ZUX3 1019 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 ERMP1Q7Z2K6 904 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 TRMT11Q7Z4G4 463 aaKnown RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 SCML4Q8N228 414 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 P2RY11Q96G91 374 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 ZC3H10Q96K80 434 aaKnown RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 CRACR2AQ9BSW2 395 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 DUSP15Q9H1R2 295 aaPredicted RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 UBE2TQ9NPD8 197 aaPredicted RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 OLA1Q9NTK5 396 aaKnown RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 CDV3Q9UKY7 258 aaKnown RBP11.27□□□□□ -0.61
LMCD1-205ENST00000454244 HCN2Q9UL51 889 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 MYH10P35580 1976 aa11.27□□□□□ -0.61
LMCD1-205ENST00000454244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 TCRBV21S2A2A0A5A6 115 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 PRRT4C9JH25 899 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 RHOBTB1O94844 696 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 PENKP01210 267 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 HOXB2P14652 356 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 SDHBP21912 280 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 BCKDHBP21953 392 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 CHKAP35790 457 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 TRIP4Q15650 581 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 TPD52L1Q16890 204 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 FYB2Q5VWT5 728 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 GJB7Q6PEY0 223 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 IRF2BP1Q8IU81 584 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 PGBD3Q8N328 593 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 RLN3Q8WXF3 142 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 PLD4Q96BZ4 506 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 HSFY1Q96LI6 401 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 ACOX2Q99424 681 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 ABCC13Q9NSE7 274 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 BCCIPQ9P287 314 aaKnown RBP eCLIP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 FBXO10Q9UK96 956 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 CNTN6Q9UQ52 1028 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 STARD13Q9Y3M8 1113 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 HBS1LQ9Y450 684 aaKnown RBP11.26□□□□□ -0.61
LMCD1-205ENST00000454244 PCDHGA5Q9Y5G8 931 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 USP34Q70CQ2 3546 aa11.26□□□□□ -0.61
LMCD1-205ENST00000454244 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MYOFQ9NZM1 2061 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MSI1O43347 362 aaKnown RBP11.25□□□□□ -0.61
LMCD1-205ENST00000454244 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
LMCD1-205ENST00000454244 CYBBP04839 570 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 SLC9A1P19634 815 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 NTSR1P30989 418 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MPLP40238 635 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MTIF2P46199 727 aaKnown RBP11.25□□□□□ -0.61
LMCD1-205ENST00000454244 HARS2P49590 506 aaKnown RBP11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MFAP3P55082 362 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 FOXK2Q01167 660 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 APBA1Q02410 837 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 SF3A2Q15428 464 aaKnown RBP11.25□□□□□ -0.61
LMCD1-205ENST00000454244 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MSANTD2Q6P1R3 559 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 DENND1BQ6P3S1 775 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 GBP6Q6ZN66 633 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 C11orf74Q86VG3 221 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 CHPFQ8IZ52 775 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 CPXM2Q8N436 756 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 OLIG1Q8TAK6 271 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 NETO1Q8TDF5 533 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 CLEC4CQ8WTT0 213 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 IRGQQ8WZA9 623 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 ERLEC1Q96DZ1 483 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 MIS12Q9H081 205 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 SDK1Q7Z5N4 2213 aa11.25□□□□□ -0.61
LMCD1-205ENST00000454244 CEP250Q9BV73 2442 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 VPS13AQ96RL7 3174 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 THAP12O43422 761 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 MED7O43513 233 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 GDF9O60383 454 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 FOXD2O60548 495 aaPredicted RBP11.24□□□□□ -0.61
LMCD1-205ENST00000454244 TSPAN3O60637 253 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 FBXO21O94952 628 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 LTFP02788 710 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
LMCD1-205ENST00000454244 USP8P40818 1118 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms