RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP1-204ENST00000452143 OSER1Q9NX31 292 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 SUSD2Q9UGT4 822 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 DNMT3LQ9UJW3 386 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 NEUROG3Q9Y4Z2 214 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 PRRT4C9JH25 899 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 TRIM24O15164 1050 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 OPHN1O60890 802 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 CILPO75339 1184 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 RARGP13631 454 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 PFKFB1P16118 471 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 NR2F2P24468 414 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 PLA2G4AP47712 749 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 KIF11P52732 1056 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 ZNF132P52740 706 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 DNM1Q05193 864 aaKnown RBP11.46□□□□□ -0.57
USP1-204ENST00000452143 HNRNPDQ14103 355 aaKnown RBP11.46□□□□□ -0.57
USP1-204ENST00000452143 E2F5Q15329 346 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 C1orf220Q5T0J3 134 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 SPOPLQ6IQ16 392 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 TPGS1Q6ZTW0 290 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 TOGARAM2Q6ZUX3 1019 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 TTC39CQ8N584 583 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 CCDC150Q8NCX0 1101 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 GATA6Q92908 595 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 FOXJ1Q92949 421 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 CYFIP2Q96F07 1278 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 MRGPRX1Q96LB2 322 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 HSPA12BQ96MM6 686 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 TWNKQ96RR1 684 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 FAM124BQ9H5Z6 455 aaPredicted RBP11.46□□□□□ -0.57
USP1-204ENST00000452143 NMUR1Q9HB89 426 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 ZMIZ1Q9ULJ6 1067 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 ZNF510Q9Y2H8 683 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 SLC27A6Q9Y2P4 619 aa11.46□□□□□ -0.57
USP1-204ENST00000452143 LAMA5O15230 3695 aa11.46□□□□□ -0.58
USP1-204ENST00000452143 A0A1W2PQH9 124 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 H0Y626 953 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 ARHGAP33O14559 1287 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 STC2O76061 302 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 TRIM16O95361 564 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 PENKP01210 267 aaPredicted RBP11.45□□□□□ -0.58
USP1-204ENST00000452143 SYPP08247 313 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 RALAP11233 206 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 KRT13P13646 458 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 CMA1P23946 247 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 CHKAP35790 457 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 WASP42768 502 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 SIM1P81133 766 aaPredicted RBP11.45□□□□□ -0.58
USP1-204ENST00000452143 COG7P83436 770 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 SLC14A1Q13336 389 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 STARD3Q14849 445 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 C10orf120Q5SQS8 335 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 KIAA1211LQ6NV74 962 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 METTL3Q86U44 580 aaKnown RBP11.45□□□□□ -0.58
USP1-204ENST00000452143 SLC41A1Q8IVJ1 513 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 MINDY1Q8N5J2 469 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 TRIML1Q8N9V2 468 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 TAS1R2Q8TE23 839 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 CCDC47Q96A33 483 aaKnown RBP11.45□□□□□ -0.58
USP1-204ENST00000452143 JAKMIP2Q96AA8 810 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 ACOX2Q99424 681 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 GTPBP2Q9BX10 602 aaKnown RBP11.45□□□□□ -0.58
USP1-204ENST00000452143 DNAAF2Q9NVR5 837 aaKnown RBP11.45□□□□□ -0.58
USP1-204ENST00000452143 CACNA2D2Q9NY47 1150 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 NAGPAQ9UK23 515 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 FBXO10Q9UK96 956 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 CYP8B1Q9UNU6 501 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 HPSEQ9Y251 543 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 NFE2L3Q9Y4A8 694 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 USP3Q9Y6I4 520 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 BAHCC1Q9P281 2608 aa11.45□□□□□ -0.58
USP1-204ENST00000452143 NBEAQ8NFP9 2946 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 NDUFS2O75306 463 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 CISD3P0C7P0 127 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 GNSP15586 552 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 CD58P19256 250 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 SPINK2P20155 84 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 RPL13P26373 211 aaKnown RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 GTF2H1P32780 548 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 RDXP35241 583 aaKnown RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 GCLMP48507 274 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 MFAP3P55082 362 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 ENPP2Q13822 863 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 PKP1Q13835 747 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 EIF4HQ15056 248 aaKnown RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 WDR45BQ5MNZ6 344 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 SYCP2LQ5T4T6 812 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 FAM186BQ8IYM0 893 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 ARHGAP18Q8N392 663 aa11.44□□□□□ -0.58
USP1-204ENST00000452143 GUF1Q8N442 669 aaKnown RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 ZNF419Q96HQ0 510 aaPredicted RBP11.44□□□□□ -0.58
USP1-204ENST00000452143 DUSP16Q9BY84 665 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms