RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 DMWDQ09019 674 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 ANO6Q4KMQ2 910 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 BTBD8Q5XKL5 378 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 ASCL5Q7RTU5 278 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 FMNL3Q8IVF7 1028 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 USP33Q8TEY7 942 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 ERGIC2Q96RQ1 377 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 CPXM1Q96SM3 734 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 OLA1Q9NTK5 396 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 ZSCAN32Q9NX65 697 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 SFMBT1Q9UHJ3 866 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 RASAL2Q9UJF2 1139 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 HBS1LQ9Y450 684 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 R4GN57 208 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 FANCMQ8IYD8 2048 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 FRYLO94915 3013 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 SLC12A8A0AV02 714 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 E5RJQ4 531 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 F8VZ95 297 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 TRIM24O15164 1050 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 CACNG3O60359 315 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 TULP3O75386 442 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 CYP11B1P15538 503 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 CORO1AP31146 461 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 USP8P40818 1118 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 PDCLQ13371 301 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 RNF43Q68DV7 783 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 ALYREFQ86V81 257 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 SUMF1Q8NBK3 374 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 PIWIL1Q96J94 861 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 PNKPQ96T60 521 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 DCLK3Q9C098 648 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 SEMA4AQ9H3S1 761 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 ZNF510Q9Y2H8 683 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 PCDHGA2Q9Y5H1 932 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 MYO16Q9Y6X6 1858 aa16.84■□□□□ 0.29
SCAMP4-205ENST00000452128 ZNF292O60281 2723 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 KAT7O95251 611 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 IGLV3-25P01717 112 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 GRIA2P42262 883 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 TNFRSF4P43489 277 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 BPIFB4P59827 614 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 GOLGA8FQ08AF8 430 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 GOLGA8DPQ0D2H9 430 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 TAF5Q15542 800 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 FYB2Q5VWT5 728 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 SYPL2Q5VXT5 272 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 CPXM2Q8N436 756 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 AOPEPQ8N6M6 819 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 EXOC4Q96A65 974 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 PLD4Q96BZ4 506 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC39A13Q96H72 371 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 MIS12Q9H081 205 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 WDR35Q9P2L0 1181 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 NOCTQ9UK39 431 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 LSM7Q9UK45 103 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 STRIP2Q9ULQ0 834 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 NAALADL1Q9UQQ1 740 aa16.83■□□□□ 0.28
SCAMP4-205ENST00000452128 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 HMBSP08397 361 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 TYRP14679 529 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 RING1Q06587 406 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 SYCP1Q15431 976 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 EMC10Q5UCC4 262 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 RSRC2Q7L4I2 434 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 SYT13Q7L8C5 426 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 NOP9Q86U38 636 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 DENND1CQ8IV53 801 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 NAT16Q8N8M0 369 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 DQX1Q8TE96 717 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 AZIN2Q96A70 460 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC2A13Q96QE2 648 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 STARD13Q9Y3M8 1113 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
SCAMP4-205ENST00000452128 TEX33O43247 280 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 SART1O43290 800 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 MSI1O43347 362 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 ATG13O75143 517 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 LATS1O95835 1130 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 ERBB2P04626 1255 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 GLI1P08151 1106 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 HNRNPLP14866 589 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 CHRNB2P17787 502 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 GABRB2P47870 512 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 POLR2FP61218 127 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 MRPS21P82921 87 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 NNTQ13423 1086 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 RAPGEF1Q13905 1077 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 OLFML1Q6UWY5 402 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 TPGS1Q6ZTW0 290 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 RPLP0P6Q8NHW5 317 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 EPS8L1Q8TE68 723 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 RNF139Q8WU17 664 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 PPP1R13BQ96KQ4 1090 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 FCRL2Q96LA5 508 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 BBS2Q9BXC9 721 aa16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 NAT10Q9H0A0 1025 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-205ENST00000452128 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms