RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 TRIM11Q96F44 468 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 MCEEQ96PE7 176 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 KIF9Q9HAQ2 790 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.11■■□□□ 1.61
CPSF4-207ENST00000451876 CALCOCO1Q9P1Z2 691 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 SLC12A8A0AV02 714 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 ANKRD62A6NC57 917 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 SIGLEC16A6NMB1 481 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 DPYSL4O14531 572 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 NDUFA10O95299 355 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 LCA5LO95447 670 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 IGLV3-25P01717 112 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 GRM2Q14416 872 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 LRRC8AQ8IWT6 810 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 CFAP57Q96MR6 1250 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 PARVAQ9NVD7 372 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 CFAP97Q9P2B7 532 aa25.1■■□□□ 1.61
CPSF4-207ENST00000451876 EPN1Q9Y6I3 576 aaPredicted RBP25.1■■□□□ 1.61
CPSF4-207ENST00000451876 C2CD4BA6NLJ0 364 aa25.09■■□□□ 1.61
CPSF4-207ENST00000451876 TRUB2O95900 331 aaKnown RBP25.09■■□□□ 1.61
CPSF4-207ENST00000451876 HMBSP08397 361 aa25.09■■□□□ 1.61
CPSF4-207ENST00000451876 CYLC1P35663 651 aaPredicted RBP25.09■■□□□ 1.61
CPSF4-207ENST00000451876 BPIFB1Q8TDL5 484 aa25.09■■□□□ 1.61
CPSF4-207ENST00000451876 NPY6RQ99463 290 aa25.09■■□□□ 1.61
CPSF4-207ENST00000451876 DDX23Q9BUQ8 820 aaKnown RBP25.09■■□□□ 1.61
CPSF4-207ENST00000451876 OBP2AQ9NY56 170 aa25.09■■□□□ 1.61
CPSF4-207ENST00000451876 EIF3CLB5ME19 914 aaKnown RBP25.08■■□□□ 1.61
CPSF4-207ENST00000451876 STC2O76061 302 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 H2AFZP0C0S5 128 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 TCF3P15923 654 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 H2AFVQ71UI9 128 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 RXFP2Q8WXD0 754 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 NT5C3BQ969T7 300 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 EIF3CQ99613 913 aaKnown RBP25.08■■□□□ 1.61
CPSF4-207ENST00000451876 TRIM7Q9C029 511 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 IGSF9Q9P2J2 1179 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 TICRRQ7Z2Z1 1910 aa25.08■■□□□ 1.61
CPSF4-207ENST00000451876 IRAK2O43187 625 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 GREM1O60565 184 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 SULT1E1P49888 294 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 GPC5P78333 572 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 OGDHQ02218 1023 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 EIF4EBP2Q13542 120 aaPredicted RBP25.08■■□□□ 1.6
CPSF4-207ENST00000451876 MFSD6LQ8IWD5 586 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 GJD3Q8N144 294 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 E2F7Q96AV8 911 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 SERPINB11Q96P15 392 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 TBCBQ99426 244 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 FAM204AQ9H8W3 233 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 STAP1Q9ULZ2 295 aa25.08■■□□□ 1.6
CPSF4-207ENST00000451876 REXO2Q9Y3B8 237 aaKnown RBP25.08■■□□□ 1.6
CPSF4-207ENST00000451876 SYNJ2BP-COX16A0A087WUM0 186 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 M0QYT0 321 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 CYP1A2P05177 515 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 PDGFRAP16234 1089 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 PSMC3P17980 439 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 COG7P83436 770 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 FCHO2Q0JRZ9 810 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 C15orf59Q2T9L4 293 aaPredicted RBP25.07■■□□□ 1.6
CPSF4-207ENST00000451876 DCUN1D2Q6PH85 259 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 RNF135Q8IUD6 432 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 SLC44A3Q8N4M1 653 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 CTNNBL1Q8WYA6 563 aaPredicted RBP25.07■■□□□ 1.6
CPSF4-207ENST00000451876 NXPE3Q969Y0 559 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 ASIC4Q96FT7 647 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 ZFYVE19Q96K21 471 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 DDIT4Q9NX09 232 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 COX16Q9P0S2 106 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 TFR2Q9UP52 801 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 HBS1LQ9Y450 684 aaKnown RBP25.07■■□□□ 1.6
CPSF4-207ENST00000451876 SCINQ9Y6U3 715 aa25.07■■□□□ 1.6
CPSF4-207ENST00000451876 COL4A2P08572 1712 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 IGLV3-27P01718 113 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 CCZ1BP86790 482 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 CCZ1P86791 482 aaPredicted RBP25.06■■□□□ 1.6
CPSF4-207ENST00000451876 TRIP4Q15650 581 aaPredicted RBP25.06■■□□□ 1.6
CPSF4-207ENST00000451876 SLC25A52Q3SY17 297 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 CCDC14Q49A88 953 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 RAB6CQ53S08 254 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 SH3PXD2AQ5TCZ1 1133 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 DDX42Q86XP3 938 aaKnown RBP eCLIP25.06■■□□□ 1.6
CPSF4-207ENST00000451876 ACRBPQ8NEB7 543 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 DEPDC1BQ8WUY9 529 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 RAB6CQ9H0N0 254 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 TLR6Q9Y2C9 796 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 COL4A3Q01955 1670 aa25.06■■□□□ 1.6
CPSF4-207ENST00000451876 KLKB1P03952 638 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 TMEM253P0C7T8 217 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 GPD1P21695 349 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 SDC4P31431 198 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 ATXN1P54253 815 aaKnown RBP25.05■■□□□ 1.6
CPSF4-207ENST00000451876 ATP11AP98196 1134 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 ZNF252P-AS1Q0IIN9 211 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 NME3Q13232 169 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 SPA17Q15506 151 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 CDO1Q16878 200 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 BNIPLQ7Z465 357 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 SLC39A13Q96H72 371 aa25.05■■□□□ 1.6
CPSF4-207ENST00000451876 FCRL2Q96LA5 508 aaPredicted RBP25.05■■□□□ 1.6
CPSF4-207ENST00000451876 NUP85Q9BW27 656 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms