RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 SEMA4GQ9NTN9 838 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
RFX3-209ENST00000451859 WDR70Q9NW82 654 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TSPAN16Q9UKR8 245 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
RFX3-209ENST00000451859 PCDHB4Q9Y5E5 795 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 CACNA1AO00555 2505 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 CKAP5Q14008 2032 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 CNOT1A5YKK6 2376 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 BICDL2A1A5D9 508 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 TBC1D3BA6NDS4 549 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 PIK3R2O00459 728 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 TULP3O75386 442 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 TYRP14679 529 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.955e-9■■■■□ 21
RFX3-209ENST00000451859 TGM1P22735 817 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 HOXA6P31267 233 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 EIF2DP41214 584 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 PPP1R2P41236 205 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 GRIA2P42262 883 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 WASP42768 502 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 TKTL1P51854 596 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 BCAT1P54687 386 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 SLC8A3P57103 927 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 YWHAEP62258 255 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 LMNB2Q03252 620 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 PDE4CQ08493 712 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 ADIGQ0VDE8 80 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 PAK1Q13153 545 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 MORC3Q14149 939 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 PUM1Q14671 1186 aaKnown RBP eCLIP9.11□□□□□ -0.95
RFX3-209ENST00000451859 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 ARHGAP17Q68EM7 881 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 GRAMD4Q6IC98 578 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 TMEM270Q6UE05 265 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 PRR23CQ6ZRP0 262 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 RSRC2Q7L4I2 434 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 RRAGAQ7L523 313 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 CCDC186Q7Z3E2 898 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 CACNA2D4Q7Z3S7 1137 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 PGBD3Q8N328 593 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 CAMKK1Q8N5S9 505 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 GPR161Q8N6U8 529 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 OTUB2Q96DC9 234 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 CEP63Q96MT8 703 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 NT5C1BQ96P26 610 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 GTPBP4Q9BZE4 634 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 ULBP1Q9BZM6 244 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 METTL14Q9HCE5 456 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 PNPLA8Q9NP80 782 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 DNAJC17Q9NVM6 304 aaKnown RBP9.11□□□□□ -0.95
RFX3-209ENST00000451859 PLK2Q9NYY3 685 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 BCCIPQ9P287 314 aaKnown RBP eCLIP9.11□□□□□ -0.95
RFX3-209ENST00000451859 DEC1Q9P2X7 70 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 HESX1Q9UBX0 185 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 DNMT3LQ9UJW3 386 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 MMP17Q9ULZ9 603 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 COQ4Q9Y3A0 265 aa9.11□□□□□ -0.95
RFX3-209ENST00000451859 SLC12A8A0AV02 714 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 M0QYV0 167 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 SGK1O00141 431 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 HOXC11O43248 304 aaPredicted RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 STC2O76061 302 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 LCP1P13796 627 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 TBXAS1P24557 533 aaPredicted RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 BRD2P25440 801 aaKnown RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 PLA2G4AP47712 749 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 RGS7P49802 495 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 YWHAGP61981 247 aaKnown RBP eCLIP9.1□□□□□ -0.95
RFX3-209ENST00000451859 MRPS21P82921 87 aaKnown RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 SF3A2Q15428 464 aaKnown RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 CRY1Q16526 586 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 AASDHQ4L235 1098 aaPredicted RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 TOGARAM2Q6ZUX3 1019 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 TADA2BQ86TJ2 420 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 DENND1CQ8IV53 801 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 ARHGEF19Q8IW93 802 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 ETFBKMTQ8IXQ9 262 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 ZNF513Q8N8E2 541 aaPredicted RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 KIAA1958Q8N8K9 716 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 C12orf50Q8NA57 414 aaPredicted RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 IL17RCQ8NAC3 791 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 ANKRD52Q8NB46 1076 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 MDGA1Q8NFP4 955 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 CCDC26Q8TAB7 109 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 HMGB4Q8WW32 186 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 EDEM1Q92611 657 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 IPO9Q96P70 1041 aaKnown RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 XPO6Q96QU8 1125 aaKnown RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
RFX3-209ENST00000451859 LRRC4Q9HBW1 653 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 MARCH2Q9P0N8 246 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 USP3Q9Y6I4 520 aa9.1□□□□□ -0.95
RFX3-209ENST00000451859 CCDC163A0A0D9SF12 145 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms