RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 GOLGA6CA6NDK9 693 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 SCAMP3O14828 347 aaKnown RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FSBPO95073 299 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 SERPING1P05155 500 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FYNP06241 537 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 GOLGA6DP0CG33 693 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 LAMP2P13473 410 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 TNFAIP3P21580 790 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 EIF4A3P38919 411 aaKnown RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 VIPR2P41587 438 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 ZP2Q05996 745 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FAM78AQ5JUQ0 283 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 PARM1Q6UWI2 310 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 ZSCAN18Q8TBC5 510 aaPredicted RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 COG1Q8WTW3 980 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 STK32AQ8WU08 396 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 KHSRPQ92945 711 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 CAPS2Q9BXY5 557 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 GOLGA6AQ9NYA3 693 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 TRPM5Q9NZQ8 1165 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 UXTQ9UBK9 157 aaPredicted RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 NAGPAQ9UK23 515 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 CDH7Q9ULB5 785 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 CCDC189A1A4V9 331 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ZNF197O14709 1029 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 COCHO43405 550 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ASGR2P07307 311 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 CDC25CP30307 473 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 PITX1P78337 314 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 CENPCQ03188 943 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 FBXW10Q5XX13 1052 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ERICH1Q86X53 443 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ARID3BQ8IVW6 561 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 TTC16Q8NEE8 873 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 WBP2Q969T9 261 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 IQCDQ96DY2 449 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 CNGB3Q9NQW8 809 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 TICRRQ7Z2Z1 1910 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 COL4A3Q01955 1670 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 GOLGA8KD6RF30 607 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 EIF3HO15372 352 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 OAS1P00973 400 aaKnown RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 MMP8P22894 467 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 FCARP24071 287 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 YWHAGP61981 247 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 GFPT1Q06210 699 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ASTE1Q2TB18 679 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 SYPL2Q5VXT5 272 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 BSPRYQ5W0U4 402 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 TANGO2Q6ICL3 276 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 OR6B2Q6IFH4 312 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 TRNP1Q6NT89 227 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 OLFML1Q6UWY5 402 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 MON1AQ86VX9 555 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 XYLT1Q86Y38 959 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 OTUD6BQ8N6M0 293 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 LEMD2Q8NC56 503 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 MRPS31Q92665 395 aaKnown RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ASB16Q96NS5 453 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 SMOC2Q9H3U7 446 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 TLR8Q9NR97 1041 aaKnown RBP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 SMPD4Q9NXE4 827 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC171-203ENST00000449575 CAPN7Q9Y6W3 813 aa10.29□□□□□ -0.76
CCDC171-203ENST00000449575 GOLGA8SH3BPF8 625 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 TLR5O60602 858 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 LSM8O95777 96 aaKnown RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 RARGP13631 454 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 HDCP19113 662 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 AAK1Q2M2I8 961 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 CNGA4Q8IV77 575 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 FAM149B1Q96BN6 582 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 MIEF2Q96C03 454 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 GCNAQ96QF7 691 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 KXD1Q9BQD3 176 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 NUCKS1Q9H1E3 243 aaKnown RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 TASP1Q9H6P5 420 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 GKN1Q9NS71 199 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 NAALADL1Q9UQQ1 740 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 MIA3Q5JRA6 1907 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 LOC730098B7Z3J9 87 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 ZNF263O14978 683 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 TFE3P19532 575 aaPredicted RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 GABRB2P47870 512 aa10.28□□□□□ -0.76
CCDC171-203ENST00000449575 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 CKAP4Q07065 602 aaKnown RBP10.28□□□□□ -0.76
CCDC171-203ENST00000449575 MTF1Q14872 753 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms