RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 MARK1Q9P0L2 795 aa12.13□□□□□ -0.47
CCDC197-203ENST00000449472 MARCH2Q9P0N8 246 aa12.13□□□□□ -0.47
CCDC197-203ENST00000449472 SFMBT1Q9UHJ3 866 aa12.13□□□□□ -0.47
CCDC197-203ENST00000449472 AGO1Q9UL18 857 aaKnown RBP12.13□□□□□ -0.47
CCDC197-203ENST00000449472 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
CCDC197-203ENST00000449472 PRRT4C9JH25 899 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 CACNG3O60359 315 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 GDF9O60383 454 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
CCDC197-203ENST00000449472 CORO1AP31146 461 aaKnown RBP12.12□□□□□ -0.47
CCDC197-203ENST00000449472 ZNF132P52740 706 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 APBA1Q02410 837 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 GCNT1Q02742 428 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC197-203ENST00000449472 GRAMD4Q6IC98 578 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 GJB7Q6PEY0 223 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 RASSF3Q86WH2 238 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 FMNL3Q8IVF7 1028 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 FRMD1Q8N878 549 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 TERB1Q8NA31 727 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 MDGA1Q8NFP4 955 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 ERLEC1Q96DZ1 483 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 IPO9Q96P70 1041 aaKnown RBP12.12□□□□□ -0.47
CCDC197-203ENST00000449472 XPO6Q96QU8 1125 aaKnown RBP12.12□□□□□ -0.47
CCDC197-203ENST00000449472 SMOC1Q9H4F8 434 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 CLEC4EQ9ULY5 219 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC197-203ENST00000449472 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
CCDC197-203ENST00000449472 CNOT1A5YKK6 2376 aaKnown RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 M0QYV0 167 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 LRP3O75074 770 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 SLC9A1P19634 815 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 BCKDHBP21953 392 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 DAOAP59103 153 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 LMNB2Q03252 620 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 EOGTQ5NDL2 527 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 EGFLAMQ63HQ2 1017 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 PRR23CQ6ZRP0 262 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 DGLUCYQ7Z3D6 616 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 SCUBE3Q8IX30 993 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 ZNF513Q8N8E2 541 aaPredicted RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 OLIG1Q8TAK6 271 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 CLEC4CQ8WTT0 213 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 LOXL4Q96JB6 756 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
CCDC197-203ENST00000449472 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 CNGB3Q9NQW8 809 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 FBXO10Q9UK96 956 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 STRIP2Q9ULQ0 834 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
CCDC197-203ENST00000449472 LAMA1P25391 3075 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 NUP205Q92621 2012 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 TCRBV21S2A2A0A5A6 115 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 DCDC2BA2VCK2 349 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 WASH3PC4AMC7 463 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 ALDH1A2O94788 518 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 EPN2O95208 641 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 PENKP01210 267 aaPredicted RBP12.1□□□□□ -0.47
CCDC197-203ENST00000449472 KRT5P13647 590 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 GBP1P32455 592 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 CHKAP35790 457 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 GPD2P43304 727 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 DGKGP49619 791 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 TRIP4Q15650 581 aaPredicted RBP12.1□□□□□ -0.47
CCDC197-203ENST00000449472 HSF5Q4G112 596 aaPredicted RBP12.1□□□□□ -0.47
CCDC197-203ENST00000449472 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 ERMP1Q7Z2K6 904 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 MLKLQ8NB16 471 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 RNF139Q8WU17 664 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 HMGB4Q8WW32 186 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 MIS12Q9H081 205 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
CCDC197-203ENST00000449472 RXFP3Q9NSD7 469 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 ABCC13Q9NSE7 274 aa12.1□□□□□ -0.47
CCDC197-203ENST00000449472 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
CCDC197-203ENST00000449472 TSPAN3O60637 253 aa12.09□□□□□ -0.47
CCDC197-203ENST00000449472 RHOBTB1O94844 696 aa12.09□□□□□ -0.47
CCDC197-203ENST00000449472 FYNP06241 537 aa12.09□□□□□ -0.47
CCDC197-203ENST00000449472 ZNF806P0C7X5 589 aa12.09□□□□□ -0.47
CCDC197-203ENST00000449472 NTSR1P30989 418 aa12.09□□□□□ -0.47
CCDC197-203ENST00000449472 MFAP3P55082 362 aa12.09□□□□□ -0.47
CCDC197-203ENST00000449472 CREB5Q02930 508 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms