RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 ALYREFQ86V81 257 aaKnown RBP17.46■□□□□ 0.39
SNHG17-207ENST00000449469 WDR75Q8IWA0 830 aaKnown RBP17.46■□□□□ 0.39
SNHG17-207ENST00000449469 STKLD1Q8NE28 680 aa17.46■□□□□ 0.39
SNHG17-207ENST00000449469 ATP2A3Q93084 1043 aa17.46■□□□□ 0.39
SNHG17-207ENST00000449469 QKIQ96PU8 341 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNHG17-207ENST00000449469 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
SNHG17-207ENST00000449469 MINDY3Q9H8M7 445 aa17.46■□□□□ 0.39
SNHG17-207ENST00000449469 PLAC1Q9HBJ0 212 aa17.46■□□□□ 0.39
SNHG17-207ENST00000449469 BRCA1P38398 1863 aaKnown RBP17.46■□□□□ 0.39
SNHG17-207ENST00000449469 TBX10O75333 385 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 PFKMP08237 780 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 AOC1P19801 751 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 PSEN1P49768 467 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CLCN3P51790 818 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 STX3Q13277 289 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 AMHR2Q16671 573 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 SLC10A6Q3KNW5 377 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 TREML2Q5T2D2 321 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 SCYL2Q6P3W7 929 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 SCUBE1Q8IWY4 988 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 NDUFAF2Q8N183 169 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 DEPDC1BQ8WUY9 529 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 SCG3Q8WXD2 468 aaKnown RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CDKL2Q92772 493 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 NAT9Q9BTE0 207 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 EIF2B3Q9NR50 452 aaKnown RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 MOCS1Q9NZB8 636 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 MORF4L1Q9UBU8 362 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 SCOCQ9UIL1 159 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 DERAQ9Y315 318 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 A6NJR5 290 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 H3BRJ5 948 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 IRF6O14896 467 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 PPP1R12AO14974 1030 aaPredicted RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 GLRA3O75311 464 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CSDE1O75534 798 aaKnown RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 ALDH1A2O94788 518 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 LINGO3P0C6S8 592 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CSH1P0DML2 217 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CSH2P0DML3 217 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CYP2C8P10632 490 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 MYL4P12829 197 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CYP3A5P20815 502 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CYP2F1P24903 491 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 ZNF534Q76KX8 674 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 PRR11Q96HE9 360 aaPredicted RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 CCDC106Q9BWC9 280 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 PCMTD2Q9NV79 361 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 DPP3Q9NY33 737 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 RCOR3Q9P2K3 495 aaPredicted RBP17.45■□□□□ 0.38
SNHG17-207ENST00000449469 HESX1Q9UBX0 185 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 PLA2G4CQ9UP65 541 aa17.45■□□□□ 0.38
SNHG17-207ENST00000449469 COL1A2P08123 1366 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 SESN3P58005 492 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 AP2B1P63010 937 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 WDR60Q8WVS4 1066 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 ZNF184Q99676 751 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 FERMT1Q9BQL6 677 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 CCDC28BQ9BUN5 200 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 SLC13A1Q9BZW2 595 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 ASCC2Q9H1I8 757 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 SMYD2Q9NRG4 433 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 MAD1L1Q9Y6D9 718 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 SOCS7O14512 581 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 FKBP6O75344 327 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 ENO1P06733 434 aaKnown RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 CDC25CP30307 473 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 AQP5P55064 265 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 ACTR3P61158 418 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 THOC5Q13769 683 aaKnown RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 EEPD1Q7L9B9 569 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 CDR2LQ86X02 465 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 RBM15BQ8NDT2 890 aaKnown RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 NR1H4Q96RI1 486 aaPredicted RBP17.44■□□□□ 0.38
SNHG17-207ENST00000449469 MECRQ9BV79 373 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 DNAI2Q9GZS0 605 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 ARMCX1Q9P291 453 aa17.44■□□□□ 0.38
SNHG17-207ENST00000449469 DPPA5A6NC42 116 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 KLHL2O95198 593 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 HDAC4P56524 1084 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 MXRA7P84157 204 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 TTLL4Q14679 1199 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 INSCQ1MX18 579 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 FAXCQ5TGI0 409 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 PRAMEF18Q5VWM3 479 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 HEATR6Q6AI08 1181 aaKnown RBP17.43■□□□□ 0.38
SNHG17-207ENST00000449469 AAGABQ6PD74 315 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 DPH6Q7L8W6 267 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 ADGRG6Q86SQ4 1221 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 UNC93AQ86WB7 457 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 LINC01465Q8N7H1 131 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 SLC35F5Q8WV83 523 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
SNHG17-207ENST00000449469 PIWIL1Q96J94 861 aaKnown RBP17.43■□□□□ 0.38
SNHG17-207ENST00000449469 GGA3Q9NZ52 723 aa17.43■□□□□ 0.38
SNHG17-207ENST00000449469 CCDC189A1A4V9 331 aa17.42■□□□□ 0.38
SNHG17-207ENST00000449469 MAGEA13PA6NCF6 341 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms