RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ICAM3P32942 547 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 FSTL1Q12841 308 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 CBWD1Q9BRT8 395 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 TSSK1BQ9BXA7 367 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 KCNK13Q9HB14 408 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 PCDHGB4Q9UN71 923 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 PCDHGB5Q9Y5G0 923 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 FUCA1P04066 466 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 NOP9Q86U38 636 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ARHGEF19Q8IW93 802 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZNFX1Q9P2E3 1918 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 DENRO43583 198 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 TSHRP16473 764 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 SERPINB6P35237 376 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 ARL4CP56559 192 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 DHRS4L2Q6PKH6 230 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 USP6NLQ92738 828 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 CNBD2Q96M20 576 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 PAIP1Q9H074 479 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 FETUBQ9UGM5 382 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 SHOC2Q9UQ13 582 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 TMA7Q9Y2S6 64 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 TM9SF1O15321 606 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 MYL2P10916 166 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZNF12P17014 697 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 NUP107P57740 925 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 IRX4P78413 519 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 EFHC1Q5JVL4 640 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 KATNAL2Q8IYT4 538 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 POU5F2Q8N7G0 328 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 NOCTQ9UK39 431 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 CARD8Q9Y2G2 431 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 DTNAQ9Y4J8 743 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 A0A1W2PPM1 405 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 I3L4J1 428 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 TYROBPO43914 113 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 RBP3P10745 1247 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 FMO1Q01740 532 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 PPP3CAQ08209 521 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 SNRNP35Q16560 246 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 SLC39A4Q6P5W5 647 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 ALYREFQ86V81 257 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 MAP4K3Q8IVH8 894 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 XPNPEP1Q9NQW7 623 aa13.92□□□□□ -0.18
SYNGAP1-204ENST00000449372 IQANK1A0A1B0GTG1 560 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CNOT3O75175 753 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CD48P09326 243 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 EDNRBP24530 442 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 TBXAS1P24557 533 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 LPCAT2Q7L5N7 544 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CCDC60Q8IWA6 550 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 AHI1Q8N157 1196 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 DNERQ8NFT8 737 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 BHMTQ93088 406 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 IGKV6D-21A0A0A0MT36 114 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 K7EPI3 171 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 TRPA1O75762 1119 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 KRT4P19013 534 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 NPTX2P47972 431 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 SNAPC2Q13487 334 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 HIC1Q14526 733 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CHST13Q8NET6 341 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 POMGNT1Q8WZA1 660 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 ANKRD36BP1Q96IX9 119 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZNF696Q9H7X3 374 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 SLC38A7Q9NVC3 462 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CALB1P05937 261 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 C6orf222P0C671 652 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 THRAP10827 490 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CDK9P50750 372 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 PEX3P56589 373 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 MYBPC1Q00872 1141 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 DCAF6Q58WW2 860 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 RABGAP1LQ5R372 815 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CAPN12Q6ZSI9 719 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 MCOLN2Q8IZK6 566 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 CENPSQ8N2Z9 138 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 JPH1Q9HDC5 661 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 ADARB2Q9NS39 739 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 PARVAQ9NVD7 372 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 TBX20Q9UMR3 447 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 SRCAPQ6ZRS2 3230 aa13.91□□□□□ -0.18
SYNGAP1-204ENST00000449372 DNALI1O14645 258 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms