RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TATDN2Q93075 761 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 POP1Q99575 1024 aaKnown RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 KIAA1586Q9HCI6 787 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 GPRC5CQ9NQ84 441 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 GDF3Q9NR23 364 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 CUEDC1Q9NWM3 386 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 CRNNQ9UBG3 495 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 COL1A1P02452 1464 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 FAM86B1E9PN63 330 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 EML1O00423 815 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PPP1R11O60927 126 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 PEX14O75381 377 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 FAM86B2P0C5J1 330 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 MARCKSL1P49006 195 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 FMO5P49326 533 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 COPZ1P61923 177 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 C11orf74Q86VG3 221 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 KYQ8NBH2 561 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 MAP3K20Q9NYL2 800 aaKnown RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 DUOX1Q9NRD9 1551 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ENTPD5O75356 428 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 NOL4O94818 638 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 SLC9A3P48764 834 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 QPCTQ16769 361 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 CDO1Q16878 200 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 GPR107Q5VW38 600 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 STK32CQ86UX6 486 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ZBTB46Q86UZ6 589 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PYDC1Q8WXC3 89 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 HTRA1Q92743 480 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ILKAPQ9H0C8 392 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 GPBP1L1Q9HC44 474 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 NFKBIL1Q9UBC1 381 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 RPL26L1Q9UNX3 145 aaKnown RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 GRIN2DO15399 1336 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 CHD4Q14839 1912 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 DDTLA6NHG4 134 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 FCHO1O14526 889 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 MSH4O15457 936 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PIAS1O75925 651 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 RARGP13631 454 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 COMTP21964 271 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 SFNP31947 248 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ALDH1A3P47895 512 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PHC1P78364 1004 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 MAPK6Q16659 721 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 TIMM50Q3ZCQ8 353 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 HEATR6Q6AI08 1181 aaKnown RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 PRMT9Q6P2P2 845 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PACS1Q6VY07 963 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 KRT77Q7Z794 578 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 SGF29Q96ES7 293 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 YME1L1Q96TA2 773 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 GPATCH1Q9BRR8 931 aaKnown RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 LXNQ9BS40 222 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 IP6K2Q9UHH9 426 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 LRP6O75581 1613 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 BBOX1O75936 387 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 GP5P40197 560 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 TPTEP56180 551 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 RIPK1Q13546 671 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 FAM182AQ5T1J6 154 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PADI6Q6TGC4 694 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 EXOC3L1Q86VI1 746 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 KRT35Q92764 455 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ACSF2Q96CM8 615 aaPredicted RBP9.47□□□□□ -0.89
SMC6-207ENST00000448223 MAGEB5Q9BZ81 275 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 OSBPL6Q9BZF3 934 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 TASP1Q9H6P5 420 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 RIOX1Q9H6W3 641 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 SP140LQ9H930 580 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 SLC9A2Q9UBY0 812 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 ECM29Q5VYK3 1845 aa9.47□□□□□ -0.89
SMC6-207ENST00000448223 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 APOL3O95236 402 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 CD58P19256 250 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 SLC15A2Q16348 729 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 KHDRBS2Q5VWX1 349 aaKnown RBP9.46□□□□□ -0.89
SMC6-207ENST00000448223 NLRX1Q86UT6 975 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 C11orf70Q9BRQ4 267 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.89
SMC6-207ENST00000448223 BDH2Q9BUT1 245 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 C9orf16Q9BUW7 83 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 TEKT3Q9BXF9 490 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 IRF2BPLQ9H1B7 796 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 PREBQ9HCU5 417 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 DYRK4Q9NR20 520 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 TDRKHQ9Y2W6 561 aaKnown RBP9.46□□□□□ -0.89
SMC6-207ENST00000448223 SSNA1O43805 119 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 PABPC1P11940 636 aaKnown RBP9.46□□□□□ -0.89
SMC6-207ENST00000448223 ANXA13P27216 316 aa9.46□□□□□ -0.89
SMC6-207ENST00000448223 NPEPPSP55786 919 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms