RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 AP1G1O43747 822 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 TBC1D4O60343 1298 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 UGDHO60701 494 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 LDB3O75112 727 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 ATG13O75143 517 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PIAS2O75928 621 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PARP1P09874 1014 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 RHCEP18577 417 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 VCAM1P19320 739 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 EN2P19622 333 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 GALNSP34059 522 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PTDSS1P48651 473 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 GATMP50440 423 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 ITGA8P53708 1063 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 DSCR9P59020 149 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 EIF4A1P60842 406 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 DLGAP5Q15398 846 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 IZUMO4Q1ZYL8 232 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 SLC4A8Q2Y0W8 1093 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 NUGGCQ68CJ6 796 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 ZDHHC24Q6UX98 284 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 RTL10Q7L3V2 364 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 KCTD20Q7Z5Y7 419 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 DAAM2Q86T65 1068 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 GRAMD1CQ8IYS0 662 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 METTL25Q8N6Q8 603 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 FAM71DQ8N9W8 422 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 OR56A3Q8NH54 315 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 SMCR8Q8TEV9 937 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 HPS3Q969F9 1004 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 MSI2Q96DH6 328 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PHF21BQ96EK2 531 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 C1GALT1C1Q96EU7 318 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 P2RY11Q96G91 374 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 ZBTB45Q96K62 511 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 NUP88Q99567 741 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PIMREGQ9BSJ6 248 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 HTATIP2Q9BUP3 242 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 RNF26Q9BY78 433 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 TM6SF1Q9BZW5 370 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF518BQ9C0D4 1074 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 ZCWPW1Q9H0M4 648 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 C6orf106Q9H6K1 298 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 SMURF2Q9HAU4 748 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 MOV10Q9HCE1 1003 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 AGO4Q9HCK5 861 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 A1CFQ9NQ94 594 aaKnown RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PLK2Q9NYY3 685 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.29□□□□□ -2.2
SNHG3-203ENST00000447507 SEMA5BQ9P283 1151 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 PCDHGB1Q9Y5G3 927 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 FER1L4A9Z1Z3 1794 aa1.29□□□□□ -2.2
SNHG3-203ENST00000447507 KIF26BQ2KJY2 2108 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 KIR2DS5A0A0G2JLQ3 304 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 RPS10-NUDT3A0A1W2PQS6 291 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 KIR2DS3K7RE56 304 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 AGPSO00116 658 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 CA12O43570 354 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 SNX2O60749 519 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 OFD1O75665 1012 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 RASSF9O75901 435 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 CGAP01215 116 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 SLC3A2P08195 630 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 TMIGD3P0DMS9 266 aaPredicted RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 KITP10721 976 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 PKMP14618 531 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 KLRC1P26715 233 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 HTR1BP28222 390 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 RBL1P28749 1068 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 RFX2P48378 723 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 COMPP49747 757 aaPredicted RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 ART1P52961 327 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 RAE1P78406 368 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 DDR1Q08345 913 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 STK3Q13188 491 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 ARHGEF7Q14155 803 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 CLCA4Q14CN2 919 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 SHBQ15464 509 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 CNGA3Q16281 694 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 SMTNL2Q2TAL5 461 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 ATAT1Q5SQI0 421 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 C6orf10Q5SRN2 563 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 NPNTQ6UXI9 565 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 USP49Q70CQ1 688 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 TRILQ7L0X0 811 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 DENND1CQ8IV53 801 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 P3H2Q8IVL5 708 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 C11orf44Q8N8P7 122 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 PRPF38AQ8NAV1 312 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 DIS3LQ8TF46 1054 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 MAML1Q92585 1016 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 HES6Q96HZ4 224 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 SENP7Q9BQF6 1050 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 SEZ6LQ9BYH1 1024 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 ASPSCR1Q9BZE9 553 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 DHX36Q9H2U1 1008 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 RMI1Q9H9A7 625 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 ZMAT3Q9HA38 289 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 ZNF556Q9HAH1 456 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms