RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 DAOAP59103 153 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 RNASELQ05823 741 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 MBTPS1Q14703 1052 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 STAT4Q14765 748 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 MFSD5Q6N075 450 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 DCLRE1AQ6PJP8 1040 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 CD300LGQ6UXG3 332 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 SLC24A5Q71RS6 500 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 LRRTM3Q86VH5 581 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PALM2Q8IXS6 379 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PDIK1LQ8N165 341 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 CCDC110Q8TBZ0 833 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 MGARPQ8TDB4 240 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PXYLP1Q8TE99 480 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 NPY6RQ99463 290 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 ACBD6Q9BR61 282 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PIGVQ9NUD9 493 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 ETNK2Q9NVF9 386 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 NR2E3Q9Y5X4 410 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PTCH2Q9Y6C5 1203 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 GMNCA6NCL1 334 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 AVILO75366 819 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PIAS1O75925 651 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 DDHD2O94830 711 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 FYNP06241 537 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 ATP5DP30049 168 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 SSTR1P30872 391 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 MMP13P45452 471 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 OR1G1P47890 313 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 HTRA3P83110 453 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 TMED2Q15363 201 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 ICE2Q659A1 982 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 KCNT2Q6UVM3 1135 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 C3orf62Q6ZUJ4 267 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 NLRP14Q86W24 1093 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 FBXO36Q8NEA4 188 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 OR10T2Q8NGX3 314 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 CCT8L2Q96SF2 557 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 CNGB3Q9NQW8 809 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PAK5Q9P286 719 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 DSEQ9UL01 958 aa9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.88□□□□□ -0.83
COL6A4P1-201ENST00000446690 PDCD11Q14690 1871 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 BCLAF3A2AJT9 711 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 F5H423 210 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 OR4Q2P0C623 313 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 GRK4P32298 578 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 YWHAHQ04917 246 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 EFHC2Q5JST6 749 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 OTUD1Q5VV17 481 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 NCBP2-AS2Q69YL0 99 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 TAX1BP1Q86VP1 789 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 CDKL3Q8IVW4 592 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 SRRM1Q8IYB3 904 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 SH3TC2Q8TF17 1288 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 UROC1Q96N76 676 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 FAM193BQ96PV7 902 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 SLC2A13Q96QE2 648 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 TSEN34Q9BSV6 310 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 INTS9Q9NV88 658 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 DDIT4Q9NX09 232 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 PRG3Q9Y2Y8 225 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 SQORQ9Y6N5 450 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 C9IYK1 514 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 HHLA1C9JL84 531 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 M0QZQ0 153 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 B4GALT3O60512 393 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 CDH16O75309 829 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 EOMESO95936 686 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 LTFP02788 710 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 CYP11A1P05108 521 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 APRTP07741 180 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 GRIK1P39086 918 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 IFNAR2P48551 515 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 NR2C2P49116 596 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 GTF2A1P52655 376 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 TSPY1Q01534 308 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 LRRC14Q15048 493 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 TNFAIP8L3Q5GJ75 292 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 NOMO2Q5JPE7 1267 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 RAB41Q5JT25 222 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 CLLU1OSQ5K130 101 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 FAM171BQ6P995 826 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 VSIG1Q86XK7 387 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 SPATA2LQ8IUW3 424 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 ANKRD42Q8N9B4 389 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 CCNYQ8ND76 341 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 SCAMP5Q8TAC9 235 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 URGCPQ8TCY9 931 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 RNF139Q8WU17 664 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 ZNF296Q8WUU4 475 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 DYDC1Q8WWB3 177 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 RNF34Q969K3 372 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 NT5C3BQ969T7 300 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 PRMT1Q99873 361 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 ETNK1Q9HBU6 452 aa9.87□□□□□ -0.83
COL6A4P1-201ENST00000446690 MLXIPLQ9NP71 852 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms