RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 C17orf80Q9BSJ5 609 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SNTG2Q9NY99 539 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 TMCC3Q9ULS5 477 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 TK2O00142 265 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 LGALS2P05162 132 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 GHRP10912 638 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SLC2A4P14672 509 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CTNNB1P35222 781 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CYLC2Q14093 348 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 GLRA4Q5JXX5 417 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SPANXN3Q5MJ09 141 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 HECTD3Q5T447 861 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 HLA-DQA1Q5Y7H0 255 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CCDC60Q8IWA6 550 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
PTPN3-204ENST00000446349 CPB2Q96IY4 423 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 CCDC195A0A1B0GUA6 201 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 SMIM22K7EJ46 135 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 MED24O75448 989 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 HTR1BP28222 390 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CDH17Q12864 832 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CDK20Q8IZL9 346 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 C2CD2Q9Y426 696 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 FMN2Q9NZ56 1722 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CASTOR2A6NHX0 329 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 O00370 1275 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SLC9A1P19634 815 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CTCFP49711 727 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 PRMT9Q6P2P2 845 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 OTOP1Q7RTM1 612 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SPATA21Q7Z572 469 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 JAMLQ86YT9 394 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 TNFSF13BQ9Y275 285 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 COPG1Q9Y678 874 aaKnown RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 ARHGEF9O43307 516 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 PNMA6AP0CW24 399 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 TCF3P15923 654 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CUL3Q13618 768 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SETMARQ53H47 684 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 COBLL1Q53SF7 1204 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 ABRAQ8N0Z2 381 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 PPTC7Q8NI37 304 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SLC24A2Q9UI40 661 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 PROSCO94903 275 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 FKBP9O95302 570 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CCNG1P51959 295 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 ARMC12Q5T9G4 340 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 RGS9BPQ6ZS82 235 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 FKBP9P1Q75LS8 142 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 WNK4Q96J92 1243 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 SPATA17Q96L03 361 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 ADAM2Q99965 735 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CEP44Q9C0F1 390 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CCDC134Q9H6E4 229 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 INTS7Q9NVH2 962 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 NCKIPSDQ9NZQ3 722 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 LTN1O94822 1766 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 NOS2P35228 1153 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CHI3L1P36222 383 aaPredicted RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 CLK3P49761 638 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 APOBEC3HQ6NTF7 200 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 TATDN1Q6P1N9 297 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 GPR142Q7Z601 462 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 SERAC1Q96JX3 654 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 FANCEQ9HB96 536 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 POPDC2Q9HBU9 364 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 HTR7P34969 479 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 LY6KQ17RY6 165 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CCDC153Q494R4 210 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 TJAP1Q5JTD0 557 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 KDELC2Q7Z4H8 507 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 PALB2Q86YC2 1186 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 UBA2Q9UBT2 640 aaPredicted RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 DCTN4Q9UJW0 460 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 FBXO10Q9UK96 956 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 RRP15Q9Y3B9 282 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 PCDHGC5Q9Y5F6 944 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CHD4Q14839 1912 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 SMIM35A0A1B0GVV1 85 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 HS6ST1O60243 411 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 IFNGR2P38484 337 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 INSCQ1MX18 579 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 CLYBLQ8N0X4 340 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 POLR1EQ9GZS1 481 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 MIEF1Q9NQG6 463 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 SYBUQ9NX95 663 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 TAS2R13Q9NYV9 303 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 RUNX1T1Q06455 604 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 WLSQ5T9L3 541 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 PPP4R4Q6NUP7 873 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 FOXR2Q6PJQ5 311 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 NT5DC3Q86UY8 548 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 LRRC39Q96DD0 335 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
PTPN3-204ENST00000446349 MRPS23Q9Y3D9 190 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 TNPO3Q9Y5L0 923 aaKnown RBP8.78□□□□□ -1
PTPN3-204ENST00000446349 PTCH2Q9Y6C5 1203 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms