RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DUOXA2	Q1HG44	320 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	IYD	Q6PHW0	289 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CRLF3	Q8IUI8	442 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ARHGAP18	Q8N392	663 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	RIBC1	Q8N443	379 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CCNY	Q8ND76	341 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	NSUN6	Q8TEA1	469 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	BRD8	Q9H0E9	1235 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CAB39L	Q9H9S4	337 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CYLD	Q9NQC7	956 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ARHGEF4	Q9NR80	690 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	UBP1	Q9NZI7	540 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ACTL7B	Q9Y614	415 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	KLRG2	A4D1S0	409 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	MAGEB2	O15479	319 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	DCX	O43602	365 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	AMH	P03971	560 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	PKNOX1	P55347	436 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	YWHAZ	P63104	245 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	MRPS5	P82675	430 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	PIGH	Q14442	188 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	PRKD1	Q15139	912 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	DLG2	Q15700	870 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	SPDYE2	Q495Y8	402 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	C6orf163	Q5TEZ5	329 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	TRNP1	Q6NT89	227 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	GET4	Q7L5D6	327 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	ZNF184	Q99676	751 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	APPL1	Q9UKG1	709 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	PSAT1	Q9Y617	370 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	ATP8B3	O60423	1300 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	LRRC37A	A6NMS7	1700 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	ONECUT3	O60422	494 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	DNAJC6	O75061	913 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	STBD1	O95210	358 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	PRKCB	P05771	671 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	ITGAV	P06756	1048 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	ERVK-10	P10266	1014 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	GLRB	P48167	497 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	SLC25A11	Q02978	314 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	STX3	Q13277	289 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	GK3P	Q14409	553 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	XKR3	Q5GH77	459 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	ZNF667	Q5HYK9	610 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	NXN	Q6DKJ4	435 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	HIC2	Q96JB3	615 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	MINDY3	Q9H8M7	445 aa		12.97	□□□□□ -0.33
DDR1-238	ENST00000446312	MICAL2	O94851	1124 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ASS1	P00966	412 aa	Known RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	RARB	P10826	455 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	LCP1	P13796	627 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	AQP4	P55087	323 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ACAP1	Q15027	740 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	TCEAL1	Q15170	157 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	FASTKD1	Q53R41	847 aa	Known RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	SFT2D3	Q587I9	215 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ACOT1	Q86TX2	421 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	DEFB107A	Q8IZN7	70 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	SKA1	Q96BD8	255 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	LGMN	Q99538	433 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ELOVL4	Q9GZR5	314 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	LRCH1	Q9Y2L9	728 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	MTO1	Q9Y2Z2	717 aa	Known RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	C3orf70	A6NLC5	250 aa	Predicted RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	LYN	P07948	512 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	SUPT20HL2	P0C7V6	817 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	OSBP	P22059	807 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ADORA2B	P29275	332 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	BAG6	P46379	1132 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	MCL1	Q07820	350 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	DLG1	Q12959	904 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ITGA9	Q13797	1035 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	SUPT20HL1	Q3ZLR7	823 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	UNC5A	Q6ZN44	842 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	CTU1	Q7Z7A3	348 aa	Known RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	ZNF677	Q86XU0	584 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	PHTF2	Q8N3S3	785 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	SGF29	Q96ES7	293 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	SENP1	Q9P0U3	644 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	BTBD7	Q9P203	1132 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	HES2	Q9Y543	173 aa		12.96	□□□□□ -0.33
DDR1-238	ENST00000446312	TBXAS1	P24557	533 aa	Predicted RBP	12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	POLR2B	P30876	1174 aa	Known RBP	12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	TCF7	P36402	384 aa	Predicted RBP	12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	STAT5B	P51692	787 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	CIAPIN1	Q6FI81	312 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	OR52E8	Q6IFG1	317 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	DPY19L2	Q6NUT2	758 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	ATG14	Q6ZNE5	492 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	NME8	Q8N427	588 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	MZB1	Q8WU39	189 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	NKD2	Q969F2	451 aa	Predicted RBP	12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	FAM149B1	Q96BN6	582 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	ETNK2	Q9NVF9	386 aa		12.96	□□□□□ -0.34
DDR1-238	ENST00000446312	CAPN8	A6NHC0	703 aa		12.95	□□□□□ -0.34
DDR1-238	ENST00000446312	WDR46	O15213	610 aa	Known RBP	12.95	□□□□□ -0.34

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