RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CAPN3P20807 821 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 RBL1P28749 1068 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 GKP32189 559 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 TPTEP56180 551 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 MTAPQ13126 283 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 AARS2Q5JTZ9 985 aaKnown RBP5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 TMTC4Q5T4D3 741 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 PARS2Q7L3T8 475 aaKnown RBP5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 GALNT15Q8N3T1 639 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 FAM98AQ8NCA5 519 aaKnown RBP5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 CCDC150Q8NCX0 1101 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 SUN3Q8TAQ9 357 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 XAGE5Q8WWM1 108 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 LENG8Q96PV6 779 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 VPS45Q9NRW7 570 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 IFT80Q9P2H3 777 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 IGSF9Q9P2J2 1179 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC17A6Q9P2U8 582 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 ASAP1Q9ULH1 1129 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 DTNAQ9Y4J8 743 aa5.1□□□□□ -1.59
HMGB1P48-201ENST00000446155 COL11A2P13942 1736 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 WDR33Q9C0J8 1336 aaKnown RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 A8MVJ9 347 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 SPRY2O43597 315 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ORC4O43929 436 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 PMPCBO75439 489 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 C1QL1O75973 258 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 BAIAP3O94812 1187 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 IFIT1P09914 478 aaKnown RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 EBLN1P0CF75 366 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 IDEP14735 1019 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 PECAM1P16284 738 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 CYP2C18P33260 490 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 MCM5P33992 734 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 SERPINF1P36955 418 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 CCT8P50990 548 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 E2F1Q01094 437 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ATP1A4Q13733 1029 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ACOX1Q15067 660 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ARL6IP4Q66PJ3 421 aaKnown RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 JMJD6Q6NYC1 403 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 MTHFD1LQ6UB35 978 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 GRASPQ7Z6J2 395 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 TBC1D1Q86TI0 1168 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 RAB11FIP4Q86YS3 637 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 LRRC71Q8N4P6 559 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 HDAC2Q92769 488 aaKnown RBP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 UROC1Q96N76 676 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 DUSP26Q9BV47 211 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZCWPW1Q9H0M4 648 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 BLOC1S4Q9NUP1 217 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ADAM21Q9UKJ8 722 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 CA14Q9ULX7 337 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ADAMTS5Q9UNA0 930 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 ST3GAL5Q9UNP4 418 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC45A1Q9Y2W3 748 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 TMEM98Q9Y2Y6 226 aa5.09□□□□□ -1.59
HMGB1P48-201ENST00000446155 A6NCN8 305 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 TRIM38O00635 465 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 PCDH17O14917 1159 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 COQ9O75208 318 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 DLDP09622 509 aaKnown RBP5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 ELF1P32519 619 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 MTHFSP49914 203 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 PDE1AP54750 535 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 SOX10P56693 466 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 PSG6Q00889 435 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 NSUN2Q08J23 767 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 GPS1Q13098 491 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 SPARCL1Q14515 664 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 TTLL5Q6EMB2 1281 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 FBXO38Q6PIJ6 1188 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 C16orf54Q6UWD8 224 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 TMTC1Q8IUR5 882 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 CAGE1Q8TC20 777 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 IPO4Q8TEX9 1081 aaKnown RBP5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 TBC1D5Q92609 795 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 REPS1Q96D71 796 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 ZBTB10Q96DT7 871 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 MRIQ9BWK5 157 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 UBN1Q9NPG3 1134 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 WASH6PQ9NQA3 447 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 SEMA4GQ9NTN9 838 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 GGA3Q9NZ52 723 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 TMOD4Q9NZQ9 345 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 STEAP1Q9UHE8 339 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 TLK1Q9UKI8 766 aa5.08□□□□□ -1.6
HMGB1P48-201ENST00000446155 PSMD9O00233 223 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 KIAA0355O15063 1070 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 NDUFB7P17568 137 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 ENGP17813 658 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 CNTFP26441 200 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 KRT9P35527 623 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 EEFSECP57772 596 aaKnown RBP5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 ERCC6LQ2NKX8 1250 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 ARHGAP15Q53QZ3 475 aa5.07□□□□□ -1.6
HMGB1P48-201ENST00000446155 CLEC9AQ6UXN8 241 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms