RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PGAP3Q96FM1 320 aaPredicted RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ABHD8Q96I13 439 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RUNDC3BQ96NL0 473 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 FAM118BQ9BPY3 351 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZBP1Q9H171 429 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 LRRC19Q9H756 370 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 NMUR1Q9HB89 426 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 PCDH18Q9HCL0 1135 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZNF446Q9NWS9 450 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 HSFX1Q9UBD0 423 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 MAGED2Q9UNF1 606 aaPredicted RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 R3HDM2Q9Y2K5 976 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 SLC38A8A6NNN8 435 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TEX28O15482 410 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CSPG5O95196 566 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CTSAP10619 480 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 GBP1P32455 592 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 COILP38432 576 aaPredicted RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ALDH1A3P47895 512 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 PGFP49763 221 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 GABPB1Q06547 395 aaPredicted RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TAF10Q12962 218 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 MTMR3Q13615 1198 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 DHX34Q14147 1143 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TFDP2Q14188 446 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 DPYSL2Q16555 572 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TAZQ16635 292 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CA9Q16790 459 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ARL13BQ3SXY8 428 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TTC27Q6P3X3 843 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 BBS12Q6ZW61 710 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 PSTKQ8IV42 348 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 IFT20Q8IY31 132 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 GPR65Q8IYL9 337 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 KRT222Q8N1A0 295 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RUBCNQ92622 972 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 HAUS1Q96CS2 278 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCDC114Q96M63 670 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CEP295NLQ96MC4 621 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 DCLK3Q9C098 648 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TLR8Q9NR97 1041 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 IL37Q9NZH6 218 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 PCYOX1Q9UHG3 505 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RASAL2Q9UJF2 1139 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RAB21Q9UL25 225 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 UTP11Q9Y3A2 253 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RWDD3Q9Y3V2 267 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 NR2E3Q9Y5X4 410 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 PLXNA3P51805 1871 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 FAM92AA1XBS5 289 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZSCAN5CA6NGD5 496 aaPredicted RBP9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ERLIN1O75477 346 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 SEC24AO95486 1093 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 L1CAMP32004 1257 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 BMPR1AP36894 532 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 KCNJ1P48048 391 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 PSEN1P49768 467 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ARSEP51690 589 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 AIF1P55008 147 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 TAF12Q16514 161 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCNG2Q16589 344 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 C9orf50Q5SZB4 431 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 TCF25Q9BQ70 676 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZNF670Q9BS34 389 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 SMOC2Q9H3U7 446 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 WDCPQ9H6R7 721 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 EPB41L5Q9HCM4 733 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 WDR6Q9NNW5 1121 aaKnown RBP9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 ENTPD7Q9NQZ7 604 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 COMMD8Q9NX08 183 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 FBXW11Q9UKB1 542 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 NUDT5Q9UKK9 219 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 FZD10Q9ULW2 581 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 YIPF1Q9Y548 306 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 TRANK1O15050 2925 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 MYO7AQ13402 2215 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 GREB1Q4ZG55 1949 aa9.87□□□□□ -0.83
SMPD4P1-203ENST00000443839 LINC01553A4QN01 128 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCDC151A5D8V7 595 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 ECEL1O95672 775 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 CXCL14O95715 111 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 GAS8O95995 478 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 CNPP09543 421 aaKnown RBP9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 PYGBP11216 843 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 ADRA1BP35368 520 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 ARL4AP40617 200 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 CXCR3P49682 368 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 BYSLQ13895 437 aaKnown RBP9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 VEPH1Q14D04 833 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 BRD3Q15059 726 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 PPP1R7Q15435 360 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 KCTD19Q17RG1 926 aaPredicted RBP9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 ANKRD20A8PQ5CZ79 823 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 RASIP1Q5U651 963 aa9.86□□□□□ -0.83
SMPD4P1-203ENST00000443839 VSIG1Q86XK7 387 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms