RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 LIMA1Q9UHB6 759 aaKnown RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 CCL26Q9Y258 94 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 SLC27A5Q9Y2P5 690 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 KNTC1P50748 2209 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 A0A0U1RQJ8 604 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MEI4A8MW99 385 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 K7EQS6 105 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 M0R2N6 131 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 SGK1O00141 431 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 ZBTB39O15060 712 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 AHCYL1O43865 530 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 CILPO75339 1184 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF217O75362 1048 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 IPO7O95373 1038 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 NFATC1O95644 943 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 GSTA1P08263 222 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 OR4Q2P0C623 313 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MYBL2P10244 700 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MYF5P13349 255 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 KRT10P13645 584 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 CASP14P31944 242 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 FOSBP53539 338 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 NLRP5P59047 1200 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 YWHAHQ04917 246 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 SPAG1Q07617 926 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 PRPF4BQ13523 1007 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 UBAP2LQ14157 1087 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 CTTNQ14247 550 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 NAA25Q14CX7 972 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 NTRK3Q16288 839 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 INAVAQ3KP66 663 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 TTC19Q6DKK2 380 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 LRIG3Q6UXM1 1119 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 ATG14Q6ZNE5 492 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 USP37Q86T82 979 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 SLC41A1Q8IVJ1 513 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 EIF1ADQ8N9N8 165 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF248Q8NDW4 579 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 ACRBPQ8NEB7 543 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 OR8K1Q8NGG5 319 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MRPS31Q92665 395 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 NAF1Q96HR8 494 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 DYDC2Q96IM9 177 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MED15Q96RN5 788 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 SEPT5Q99719 369 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 OXCT2Q9BYC2 517 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 NRSN2Q9GZP1 204 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MIR1-1HGQ9H1L0 117 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 C2orf40Q9H1Z8 148 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 IL21RQ9HBE5 538 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 SLC24A3Q9HC58 644 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 CPNE5Q9HCH3 593 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 TOPORSQ9NS56 1045 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 SAMSN1Q9NSI8 373 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 ANKEF1Q9NU02 776 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 RGL1Q9NZL6 768 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 CORO1CQ9ULV4 474 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 PCDHB8Q9UN66 801 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 CYP8B1Q9UNU6 501 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 PCDHGB2Q9Y5G2 931 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 WNT6Q9Y6F9 365 aa6.82□□□□□ -1.32
HDAC6-210ENST00000441703 HELZP42694 1942 aaKnown RBP6.82□□□□□ -1.32
HDAC6-210ENST00000441703 MYO18AQ92614 2054 aaKnown RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 TEX15Q9BXT5 2789 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 IGHV1OR15-9A0A0B4J2B8 117 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 SMIM28A0A1B0GU29 152 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 GMNCA6NCL1 334 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 MYMKA6NI61 221 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 OR6C75A6NL08 312 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 TTLL13PA6NNM8 815 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 KRT86O43790 486 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 BRINP1O60477 761 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 SOAT2O75908 522 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 NDUFA10O95299 355 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 GYPCP04921 128 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 APODP05090 189 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 FESP07332 822 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 IFNAR1P17181 557 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 MAOBP27338 520 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 GCKP35557 465 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 RARRES1P49788 294 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 SOX4Q06945 474 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-210ENST00000441703 IFT88Q13099 833 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 TARDBPQ13148 414 aaKnown RBP eCLIP6.81□□□□□ -1.322e-7■■□□□ 13.5
HDAC6-210ENST00000441703 GPR17Q13304 367 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 PDCLQ13371 301 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CUL4BQ13620 913 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 RTP5Q14D33 572 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 INF2Q27J81 1249 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 MGAT5BQ3V5L5 792 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CCDC38Q502W7 563 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 ANKRD20A8PQ5CZ79 823 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 XKR4Q5GH76 650 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 EEF1DP3Q658K8 133 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 CENPPQ6IPU0 288 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 GALNT17Q6IS24 598 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 MFN1Q8IWA4 741 aa6.81□□□□□ -1.32
HDAC6-210ENST00000441703 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms