RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ATP1A3P13637 1013 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 USP8P40818 1118 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 LMNB2Q03252 620 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 SRSF5Q13243 272 aaKnown RBP19.08■□□□□ 0.64
SMPD4-210ENST00000441135 RAPGEF1Q13905 1077 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 DMC1Q14565 340 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 PREPLQ4J6C6 727 aaPredicted RBP19.08■□□□□ 0.64
SMPD4-210ENST00000441135 BTBD8Q5XKL5 378 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 HTR3DQ70Z44 454 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 BHLHA9Q7RTU4 235 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 USP33Q8TEY7 942 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 HHIPQ96QV1 700 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 KLF16Q9BXK1 252 aaPredicted RBP19.08■□□□□ 0.64
SMPD4-210ENST00000441135 LHX5Q9H2C1 402 aa19.08■□□□□ 0.64
SMPD4-210ENST00000441135 F8VZ95 297 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 K7EQS6 105 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 RPP40O75818 363 aaKnown RBP19.07■□□□□ 0.64
SMPD4-210ENST00000441135 KAT7O95251 611 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 TBX18O95935 607 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 APODP05090 189 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 CLCN1P35523 988 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 GRIA2P42262 883 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 PXNP49023 591 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-210ENST00000441135 DAOAP59103 153 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 YWHAGP61981 247 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMPD4-210ENST00000441135 TPM4P67936 248 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 MRPS21P82921 87 aaKnown RBP19.07■□□□□ 0.64
SMPD4-210ENST00000441135 UBXN1Q04323 297 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 SYCP1Q15431 976 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 C10orf120Q5SQS8 335 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 SLC4A5Q9BY07 1137 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 ARHGEF4Q9NR80 690 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 SPHK2Q9NRA0 654 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 OLA1Q9NTK5 396 aaKnown RBP19.07■□□□□ 0.64
SMPD4-210ENST00000441135 USP18Q9UMW8 372 aa19.07■□□□□ 0.64
SMPD4-210ENST00000441135 AXIN1O15169 862 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 GABBR2O75899 941 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 CALCAP01258 141 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 HOXC13P31276 330 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 SEC13P55735 322 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 FOXK2Q01167 660 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 HSF5Q4G112 596 aaPredicted RBP19.06■□□□□ 0.64
SMPD4-210ENST00000441135 C2orf27AQ580R0 203 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 DENND1BQ6P3S1 775 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 TMEM110Q86TL2 294 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 C12orf40Q86WS4 652 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 ETFBKMTQ8IXQ9 262 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 RMDN1Q96DB5 314 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 CBX8Q9HC52 389 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 ACP6Q9NPH0 428 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
SMPD4-210ENST00000441135 EBF1Q9UH73 591 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 MMP17Q9ULZ9 603 aa19.06■□□□□ 0.64
SMPD4-210ENST00000441135 A0A0A0MRY4 1105 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 PRR5-ARHGAP8B1AHC4 643 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 GREM1O60565 184 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 SDHBP21912 280 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 SLC6A11P48066 632 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 JAM2P57087 298 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 COG7P83436 770 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 ARHGAP8P85298 464 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 ANO4Q32M45 955 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 FILIP1LQ4L180 1135 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 NUDT18Q6ZVK8 323 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 BEND5Q7L4P6 421 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 ERMP1Q7Z2K6 904 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 CACNA2D4Q7Z3S7 1137 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 SLC47A2Q86VL8 602 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 FAM160A2Q8N612 972 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-210ENST00000441135 TSTD1Q8NFU3 115 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 NEK11Q8NG66 645 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 WBP2Q969T9 261 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 LOXL4Q96JB6 756 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 TRIM62Q9BVG3 475 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 ABCC13Q9NSE7 274 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 FAM207AQ9NSI2 230 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-210ENST00000441135 POLR3BQ9NW08 1133 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-210ENST00000441135 DEC1Q9P2X7 70 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 CEP83Q9Y592 693 aa19.05■□□□□ 0.64
SMPD4-210ENST00000441135 CEP250Q9BV73 2442 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 A0A1B0GTH6 734 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 YJEFN3A6XGL0 299 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 E7ENQ6 273 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 FOXD2O60548 495 aaPredicted RBP19.04■□□□□ 0.64
SMPD4-210ENST00000441135 TULP3O75386 442 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 CYP11B1P15538 503 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 TGM1P22735 817 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 CDH5P33151 784 aaPredicted RBP19.04■□□□□ 0.64
SMPD4-210ENST00000441135 KRT9P35527 623 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 TNFRSF4P43489 277 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 RGS7P49802 495 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 KLK7P49862 253 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 DGKEP52429 567 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 SNX16P57768 344 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 POLR2FP61218 127 aaKnown RBP19.04■□□□□ 0.64
SMPD4-210ENST00000441135 KDSRQ06136 332 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 PDCLQ13371 301 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 PUM1Q14671 1186 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMPD4-210ENST00000441135 NFKBIBQ15653 356 aa19.04■□□□□ 0.64
SMPD4-210ENST00000441135 BSPRYQ5W0U4 402 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms