RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SCYL2Q6P3W7 929 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 TMC5Q6UXY8 1006 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 POLNQ7Z5Q5 900 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 ARFGAP1Q8N6T3 406 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 C12orf76Q8N812 135 aaPredicted RBP21.56■■□□□ 1.04
CHD3-204ENST00000439235 ADAM32Q8TC27 787 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 FAM161BQ96MY7 647 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 TLR10Q9BXR5 811 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 ADAM33Q9BZ11 813 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.56■■□□□ 1.04
CHD3-204ENST00000439235 MARCH2Q9P0N8 246 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 COX16Q9P0S2 106 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 DNMT3LQ9UJW3 386 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 NUDT5Q9UKK9 219 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 PACSIN2Q9UNF0 486 aaPredicted RBP21.56■■□□□ 1.04
CHD3-204ENST00000439235 CHD9Q3L8U1 2897 aa21.56■■□□□ 1.04
CHD3-204ENST00000439235 A0A1W2PRU2 124 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 ENC1O14682 589 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 ATP1A1P05023 1023 aaKnown RBP21.55■■□□□ 1.04
CHD3-204ENST00000439235 GJC1P36383 396 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 KPNA1P52294 538 aaPredicted RBP21.55■■□□□ 1.04
CHD3-204ENST00000439235 TAS2R40P59535 323 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 CYP4F8P98187 520 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 SLC25A11Q02978 314 aaKnown RBP21.55■■□□□ 1.04
CHD3-204ENST00000439235 RARS2Q5T160 578 aaKnown RBP21.55■■□□□ 1.04
CHD3-204ENST00000439235 GRASPQ7Z6J2 395 aaPredicted RBP21.55■■□□□ 1.04
CHD3-204ENST00000439235 KIF18AQ8NI77 898 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 ZNF592Q92610 1267 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 TRPC7Q9HCX4 862 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 PIGVQ9NUD9 493 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 DDX56Q9NY93 547 aaKnown RBP21.55■■□□□ 1.04
CHD3-204ENST00000439235 PCSK1NQ9UHG2 260 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 SFMBT1Q9UHJ3 866 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 ZMYM5Q9UJ78 669 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 PCDHA3Q9Y5H8 950 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 A0A0C4DFX4 3053 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 CLUHO75153 1309 aa21.55■■□□□ 1.04
CHD3-204ENST00000439235 SOBPA7XYQ1 873 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 COCHO43405 550 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 AIF1P55008 147 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 TRIP4Q15650 581 aaPredicted RBP21.54■■□□□ 1.04
CHD3-204ENST00000439235 ARL13BQ3SXY8 428 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 BRMS1LQ5PSV4 323 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 DNTTIP2Q5QJE6 756 aaKnown RBP21.54■■□□□ 1.04
CHD3-204ENST00000439235 GPR149Q86SP6 731 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 FAM131BQ86XD5 332 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 MIB1Q86YT6 1006 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 SHKBP1Q8TBC3 707 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 RNF34Q969K3 372 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 CALCOCO1Q9P1Z2 691 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 TLR6Q9Y2C9 796 aa21.54■■□□□ 1.04
CHD3-204ENST00000439235 HBS1LQ9Y450 684 aaKnown RBP21.54■■□□□ 1.04
CHD3-204ENST00000439235 ZNF638Q14966 1978 aaKnown RBP21.54■■□□□ 1.04
CHD3-204ENST00000439235 SLC12A8A0AV02 714 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 C2orf78A6NCI8 922 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 MDM4O15151 490 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 DDX3YO15523 660 aaKnown RBP21.53■■□□□ 1.04
CHD3-204ENST00000439235 MSI1O43347 362 aaKnown RBP21.53■■□□□ 1.04
CHD3-204ENST00000439235 OLFM2O95897 454 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 TBX18O95935 607 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 SLC2A3P11169 496 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 CCR1P32246 355 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 CXCR3P49682 368 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 DNA2P51530 1060 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 ATXN1P54253 815 aaKnown RBP21.53■■□□□ 1.04
CHD3-204ENST00000439235 RWDD2BP57060 319 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 TBX4P57082 545 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 EIF4EBP2Q13542 120 aaPredicted RBP21.53■■□□□ 1.04
CHD3-204ENST00000439235 RAB6CQ53S08 254 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 BOLA3Q53S33 107 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 PRSS36Q5K4E3 855 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 ZFYVE27Q5T4F4 411 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 TEKT4Q8WW24 435 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 KRT35Q92764 455 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 NTAN1Q96AB6 310 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 PEBP4Q96S96 227 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 RAB6CQ9H0N0 254 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 ZWILCHQ9H900 591 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 WDR6Q9NNW5 1121 aaKnown RBP21.53■■□□□ 1.04
CHD3-204ENST00000439235 CLDND1Q9NY35 253 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 SNX12Q9UMY4 172 aa21.53■■□□□ 1.04
CHD3-204ENST00000439235 TRAV19A0A0A6YYK7 116 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 APOEP02649 317 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 TCF4P15884 667 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 TCP1P17987 556 aaKnown RBP21.52■■□□□ 1.04
CHD3-204ENST00000439235 IL1R2P27930 398 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 CCR2P41597 374 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 NTHL1P78549 312 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 COG7P83436 770 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 ITIH3Q06033 890 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 MTA1Q13330 715 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 PPP2R5DQ14738 602 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 CTC1Q2NKJ3 1217 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 ODF2Q5BJF6 829 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 PAPD7Q5XG87 772 aaKnown RBP21.52■■□□□ 1.04
CHD3-204ENST00000439235 TXNDC8Q6A555 127 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 SYCE2Q6PIF2 218 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 PSTKQ8IV42 348 aaKnown RBP21.52■■□□□ 1.04
CHD3-204ENST00000439235 KATNAL2Q8IYT4 538 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 MICALL1Q8N3F8 863 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms