RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RBM12BQ8IXT5 1001 aaKnown RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 PIWIL2Q8TC59 973 aaKnown RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 WDR55Q9H6Y2 383 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 SEPT9Q9UHD8 586 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 E7ESA3 106 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 MAPTP10636 758 aaKnown RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 XRCC1P18887 633 aaPredicted RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 RBL1P28749 1068 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 IDH3AP50213 366 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 EMP3P54852 163 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 CDH6P55285 790 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 AOC3Q16853 763 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 C15orf59Q2T9L4 293 aaPredicted RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 PTPN20Q4JDL3 420 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 KYAT3Q6YP21 454 aaKnown RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 UNC5AQ6ZN44 842 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 LILRA2Q8N149 483 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 SNX31Q8N9S9 440 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 DEPDC1BQ8WUY9 529 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 AGO4Q9HCK5 861 aaKnown RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 AGO2Q9UKV8 859 aaKnown RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 FAF1Q9UNN5 650 aaPredicted RBP13.83□□□□□ -0.19
ACTN1-204ENST00000438964 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.19
ACTN1-204ENST00000438964 EDN1P05305 212 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 ENO3P13929 434 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-204ENST00000438964 CDH8P55286 799 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 MYL6P60660 151 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 PSMC1P62191 440 aaKnown RBP13.83□□□□□ -0.2
ACTN1-204ENST00000438964 ROR1Q01973 937 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 CYLC2Q14093 348 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-204ENST00000438964 PSMD6Q15008 389 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 TEDDM1Q5T9Z0 273 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 ITPRIPL1Q6GPH6 555 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 TMC2Q8TDI7 906 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 LRGUKQ96M69 825 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 YIPF2Q9BWQ6 316 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 UNKQ9C0B0 810 aaKnown RBP13.83□□□□□ -0.2
ACTN1-204ENST00000438964 MTMR12Q9C0I1 747 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.2
ACTN1-204ENST00000438964 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
ACTN1-204ENST00000438964 PPEF1O14829 653 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 TRMUO75648 421 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 MIPP30301 263 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 TCF7P36402 384 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ETFBP38117 255 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SLC25A11Q02978 314 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 C16orf72Q14CZ0 275 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SLC9B1Q4ZJI4 515 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SWSAP1Q6NVH7 229 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 LENG8Q96PV6 779 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 CDRT15Q96T59 188 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 CAAP1Q9H8G2 361 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.26e-7■■■■■ 31.5
ACTN1-204ENST00000438964 HERC5Q9UII4 1024 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 PSAT1Q9Y617 370 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SPDYE2BA6NHP3 402 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SPDYE6P0CI01 402 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ARSAP15289 507 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 AOC1P19801 751 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ENTPD1P49961 510 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 THOP1P52888 689 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SLC10A2Q12908 348 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 OLIG2Q13516 323 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 KRT81Q14533 505 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 TMEM198Q66K66 360 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 C15orf52Q6ZUT6 534 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 CMC1Q7Z7K0 106 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 CAND1Q86VP6 1230 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 FBXW8Q8N3Y1 598 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 MAPK15Q8TD08 544 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 MASTLQ96GX5 879 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 PIWIL1Q96J94 861 aaKnown RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 CATSPER2Q96P56 530 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 RIT2Q99578 217 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ARMC7Q9H6L4 198 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ZDHHC7Q9NXF8 308 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 FBXO40Q9UH90 709 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 TPP1O14773 563 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 COQ9O75208 318 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 SNNO75324 88 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-204ENST00000438964 C1QAP02745 245 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 P4HA1P13674 534 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 MS4A2Q01362 244 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 C1QTNF12Q5T7M4 302 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 KLC3Q6P597 504 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ANKRD23Q86SG2 305 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 ZNF677Q86XU0 584 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 OR52B2Q96RD2 323 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 PEBP4Q96S96 227 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 PKP2Q99959 881 aa13.82□□□□□ -0.2
ACTN1-204ENST00000438964 TCHPQ9BT92 498 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms