RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SBF1O95248 1867 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 ARHGEF5Q12774 1597 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 ABCA2Q9BZC7 2435 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 MYMKA6NI61 221 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 DSCR3O14972 297 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 VNN1O95497 513 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 SNHG28P0DPA3 235 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 MYCLP12524 364 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 XRCC6P12956 609 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 KCNA3P22001 575 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 TKTP29401 623 aaKnown RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 RAPGEF1Q13905 1077 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZNF268Q14587 947 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 FAM187BQ17R55 369 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 KLHL22Q53GT1 634 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 ATAT1Q5SQI0 421 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 FBXO46Q6PJ61 603 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 SHC4Q6S5L8 630 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 DPY19L3Q6ZPD9 716 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 IRF2BP2Q7Z5L9 587 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZBTB46Q86UZ6 589 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 GRAMD1CQ8IYS0 662 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 SAMD14Q8IZD0 417 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 NRACQ8N912 160 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 C16orf52Q8NHV5 167 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 ADAMTS18Q8TE60 1221 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 HPS3Q969F9 1004 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 COQ8BQ96D53 544 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 C1GALT1C1Q96EU7 318 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 MRGPRX1Q96LB2 322 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 FYTTD1Q96QD9 318 aaKnown RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 PRR25Q96S07 402 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 MMS19Q96T76 1030 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 NUP88Q99567 741 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 EFHD1Q9BUP0 239 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 BRIP1Q9BX63 1249 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 TUBGCP6Q96RT7 1819 aa3.6□□□□□ -1.83
HMGB1P18-201ENST00000438801 BTBD19C9JJ37 291 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 TMEM232C9JQI7 657 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 A1BGP04217 495 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 CCKBRP32239 447 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 PRKAG1P54619 331 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 RBMS2Q15434 407 aaKnown RBP3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 BCDIN3DQ7Z5W3 292 aaKnown RBP3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 GAS2L3Q86XJ1 694 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZDHHC17Q8IUH5 632 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 SLC15A4Q8N697 577 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 SIRT6Q8N6T7 355 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 CUL5Q93034 780 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 RSPRY1Q96DX4 576 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 CCDC17Q96LX7 622 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 EBF3Q9H4W6 596 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 TCF7L1Q9HCS4 588 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 PIH1D1Q9NWS0 290 aaKnown RBP3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 STAP2Q9UGK3 403 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 AMFRQ9UKV5 643 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 SPATA31A1Q5TZJ5 1347 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 NPHP3Q7Z494 1330 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 PIEZO2Q9H5I5 2752 aa3.59□□□□□ -1.83
HMGB1P18-201ENST00000438801 PXDNQ92626 1479 aa3.59□□□□□ -1.84
HMGB1P18-201ENST00000438801 SPEGQ15772 3267 aa3.59□□□□□ -1.84
HMGB1P18-201ENST00000438801 RIF1Q5UIP0 2472 aaKnown RBP3.59□□□□□ -1.84
HMGB1P18-201ENST00000438801 TEX15Q9BXT5 2789 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 A0A087WWL8 130 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 A0A088AWK7 358 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 H3BNC9 293 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 CES2O00748 559 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 ADAM10O14672 748 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 GCATO75600 419 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 FGAP02671 866 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMEM191BP0C7N4 346 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 RAB1AP62820 205 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 PSG6Q00889 435 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 GHRHRQ02643 423 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 FGL2Q14314 439 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 BRDTQ58F21 947 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 RUSC1-AS1Q66K80 236 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 LMBRD2Q68DH5 695 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 SFTPA1Q8IWL2 248 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 BPIFB1Q8TDL5 484 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMEM171Q8WVE6 324 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 PPP2R3CQ969Q6 453 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 PCDH12Q9NPG4 1184 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 HOMER2Q9NSB8 354 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 ASIC5Q9NY37 505 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 MTMR4Q9NYA4 1195 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZNF580Q9UK33 172 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 ANKRD6Q9Y2G4 727 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 COL4A3BPQ9Y5P4 624 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 TECPR2O15040 1411 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 RRBP1Q9P2E9 1410 aaKnown RBP3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 TRPM2O94759 1503 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 DUOX2Q9NRD8 1548 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 N4BP2Q86UW6 1770 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 TCF20Q9UGU0 1960 aaKnown RBP3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 NAV3Q8IVL0 2385 aa3.58□□□□□ -1.84
HMGB1P18-201ENST00000438801 XIRP2A4UGR9 3374 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 HFM1A2PYH4 1435 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 CCDC144AA2RUR9 1427 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 PSMD9O00233 223 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms