RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TTC34A8MYJ7 566 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 FCHO1O14526 889 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 MGST3O14880 152 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 PCDH17O14917 1159 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 CTIFO43310 598 aaKnown RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 DHHO43323 396 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 SUV39H1O43463 412 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 DNPH1O43598 174 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 LARGE1O95461 756 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 NUDT3O95989 172 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 TMIGD3P0DMS9 266 aaPredicted RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 MATN1P21941 496 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 DUSP1P28562 367 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 HALP42357 657 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 CDK7P50613 346 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 COPB1P53618 953 aaKnown RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 AP2B1P63010 937 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 CYP4F2P78329 520 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 PSG6Q00889 435 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 DHX8Q14562 1220 aaKnown RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 RNASE12Q5GAN4 147 aaKnown RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 TANGO2Q6ICL3 276 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 KIRREL2Q6UWL6 708 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 VSTM1Q6UX27 236 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 SERPINA13PQ6UXR4 307 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 KRT27Q7Z3Y8 459 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 TRABD2AQ86V40 505 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 EXOC8Q8IYI6 725 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 NKAPQ8N5F7 415 aaKnown RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 MYCT1Q8N699 235 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 FAR2Q96K12 515 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 HS6ST2Q96MM7 605 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 RTKNQ9BST9 563 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 MAGEH1Q9H213 219 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 USP29Q9HBJ7 922 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 ASB6Q9NWX5 421 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 SH3BP4Q9P0V3 963 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 ARPP21Q9UBL0 812 aaPredicted RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 UBE2J1Q9Y385 318 aaPredicted RBP4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 SPATA31A1Q5TZJ5 1347 aa4.35□□□□□ -1.71
LSM1P1-201ENST00000438629 POC1B-GALNT4F8VUJ3 575 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 H3BNC9 293 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 ACKR2O00590 384 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 ZNF213O14771 459 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 TAF5LO75529 589 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 GCATO75600 419 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 ACTL6BO94805 426 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 PDE8BO95263 885 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 C1RP00736 705 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 SLC3A2P08195 630 aaKnown RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 CHRM5P08912 532 aaPredicted RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 IGHMBP2P38935 993 aaKnown RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 GPC5P78333 572 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 DEUP1Q05D60 604 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 PRKG1Q13976 671 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 GRM4Q14833 912 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 TBRG1Q3YBR2 411 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 TRIM60Q495X7 471 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 CERKLQ49MI3 558 aaPredicted RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 GRHL2Q6ISB3 625 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 ACSM6Q6P461 480 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 NFRKBQ6P4R8 1299 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 TMEM65Q6PI78 240 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 PIK3AP1Q6ZUJ8 805 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 RAB11FIP2Q7L804 512 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 ARHGEF25Q86VW2 580 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 SLC44A2Q8IWA5 706 aaPredicted RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 GALNT15Q8N3T1 639 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 GALNT4Q8N4A0 578 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 LINC01465Q8N7H1 131 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 ANKRD42Q8N9B4 389 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 OTUD7AQ8TE49 926 aaPredicted RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 TMEM120AQ9BXJ8 343 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 SAYSD1Q9NPB0 183 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 FZD4Q9ULV1 537 aa4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 MORC2Q9Y6X9 1032 aaPredicted RBP4.34□□□□□ -1.71
LSM1P1-201ENST00000438629 KAT6AQ92794 2004 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 COL11A2P13942 1736 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 GXYLT2A0PJZ3 443 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 TRIM38O00635 465 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 CA12O43570 354 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 NBNO60934 754 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 TNFRSF6BO95407 300 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 BMP5P22003 454 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 FPR3P25089 353 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 AKT1P31749 480 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 PPM1FP49593 454 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 RENBPP51606 427 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 JAK3P52333 1124 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 COL10A1Q03692 680 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 INO80DQ53TQ3 878 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 ZNF362Q5T0B9 420 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 MSANTD2Q6P1R3 559 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 FBXO42Q6P3S6 717 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 BCDIN3DQ7Z5W3 292 aaKnown RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 C16orf71Q8IYS4 520 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms