RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 HSPA5P11021 654 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TNNT1P13805 278 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 KRT15P19012 456 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBXAS1P24557 533 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ABCD3P28288 659 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CST5P28325 142 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 SKIV2L2P42285 1042 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ASMTP46597 345 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 STAT5BP51692 787 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC16A1P53985 500 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 PRKAA2P54646 552 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 STARD6P59095 220 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 AP2B1P63010 937 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCNA1P78396 465 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 HTD2P86397 168 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CD83Q01151 205 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 AIMP1Q12904 312 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 EPS8Q12929 822 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 PAK1Q13153 545 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 NFE2L1Q14494 772 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 SEC23AQ15436 765 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ALG11Q2TAA5 492 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CT83Q5H943 113 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 HABP4Q5JVS0 413 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 MTFR2Q6P444 385 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 KLHDC10Q6PID8 442 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 Q6ZPA2 131 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CXXC5Q7LFL8 322 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC186Q7Z3E2 898 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 DZIP1Q86YF9 867 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 NLGN4XQ8N0W4 816 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TTC39CQ8N584 583 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 FANCBQ8NB91 859 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 LINS1Q8NG48 757 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CYP2W1Q8TAV3 490 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 SH3RF2Q8TEC5 729 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBC1D22AQ8WUA7 517 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 AFG1LQ8WV93 481 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 THAP4Q8WY91 577 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC114Q96M63 670 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 LZTS2Q9BRK4 669 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZPBPQ9BS86 351 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 BOCQ9BWV1 1114 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZCWPW1Q9H0M4 648 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 C1orf21Q9H246 121 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 RIOX1Q9H6W3 641 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 COPS7BQ9H9Q2 264 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 MSL2Q9HCI7 577 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNHIT6Q9NWK9 470 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 GALNT8Q9NY28 637 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBC1D14Q9P2M4 693 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 DNAJB9Q9UBS3 223 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 MORF4L1Q9UBU8 362 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBX20Q9UMR3 447 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 EDARQ9UNE0 448 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 MAN2B2Q9Y2E5 1009 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 PSAT1Q9Y617 370 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 A0A0G2JNJ9 132 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TCRBV5S4A2TA0A5A2 114 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 A8MXE2 369 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ISM1B1AKI9 464 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PODXLO00592 558 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 VILLO15195 856 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PROM1O43490 865 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TSC22D2O75157 780 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 KRT37O76014 449 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PEX11BO96011 259 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 GCP02774 474 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TUBB4AP04350 444 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PDHBP11177 359 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TOP1P11387 765 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 BRAFP15056 766 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TMEM11P17152 192 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TM4SF1P30408 202 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC7A1P30825 629 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 GJA4P35212 333 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTGS2P35354 604 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PSMC4P43686 418 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 ATP5OP48047 213 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 IFNAR2P48551 515 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 HNMTP50135 292 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 SCNN1GP51170 649 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PSMC6P62333 389 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC25A3Q00325 362 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 DSC2Q02487 901 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 COL10A1Q03692 680 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC20A2Q08357 652 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 SP140Q13342 867 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 MAMLD1Q13495 774 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PRPF4BQ13523 1007 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 RIN1Q13671 783 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 FGL2Q14314 439 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 EIF4HQ15056 248 aaKnown RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 PPP1R7Q15435 360 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 RAB30Q15771 203 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 TBCEQ15813 527 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 C2orf76Q3KRA6 126 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 BMP2KLQ5H9B9 411 aa3.88□□□□□ -1.79
HMGB1P12-201ENST00000438594 DCAF17Q5H9S7 520 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms