RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 KRT40Q6A162 431 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 C16orf54Q6UWD8 224 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 RBM43Q6ZSC3 357 aaKnown RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 ZNF572Q7Z3I7 529 aaPredicted RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 RTKN2Q8IZC4 609 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 CERS5Q8N5B7 392 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 SNX27Q96L92 541 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 FUCA2Q9BTY2 467 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 SAYSD1Q9NPB0 183 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 MOCS1Q9NZB8 636 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 SLC23A1Q9UHI7 598 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 FEM1BQ9UK73 627 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 TCRBV7S2A1N4TA0A589 114 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 C2orf78A6NCI8 922 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 MBD3L4A6NDZ8 208 aaPredicted RBP6.9□□□□□ -1.3
SPEN-202ENST00000438066 MBD3L3A6NE82 208 aaPredicted RBP6.9□□□□□ -1.3
SPEN-202ENST00000438066 B4E171 279 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 H0YIN7 160 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 MYO1CO00159 1063 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 FCHO1O14526 889 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 ABLIM1O14639 778 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 NMT2O60551 498 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 DNAJB5O75953 348 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 USP1O94782 785 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 YEATS4O95619 227 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 TBX18O95935 607 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 ITGA2BP08514 1039 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 CALM1P0DP23 149 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 CALM2P0DP24 149 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 CALM3P0DP25 149 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 JUPP14923 745 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 TSPAN7P41732 249 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 YBX1P67809 324 aaKnown RBP6.9□□□□□ -1.3
SPEN-202ENST00000438066 SETQ01105 290 aaPredicted RBP6.9□□□□□ -1.3
SPEN-202ENST00000438066 C4orf50Q6ZRC1 276 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 GATAD2AQ86YP4 633 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 YAF2Q8IY57 180 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 PLA2G15Q8NCC3 412 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 IL17RDQ8NFM7 739 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 OR1N1Q8NGS0 311 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 SPPL3Q8TCT6 385 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 WASF1Q92558 559 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 NELL2Q99435 816 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 PACSIN1Q9BY11 444 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 RNF26Q9BY78 433 aaPredicted RBP6.9□□□□□ -1.3
SPEN-202ENST00000438066 SLC6A17Q9H1V8 727 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 TSPY26PQ9H489 355 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 DDX19AQ9NUU7 478 aaKnown RBP6.9□□□□□ -1.3
SPEN-202ENST00000438066 CFAP97Q9P2B7 532 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 PAXBP1Q9Y5B6 917 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 ATRNL1Q5VV63 1379 aa6.9□□□□□ -1.3
SPEN-202ENST00000438066 A0A087WWL8 130 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 GOLGA6L4A6NEF3 574 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 RAB27BO00194 218 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 TEX33O43247 280 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 COBLO75128 1261 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 TOX4O94842 621 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 DEXIO95424 95 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 MMP1P03956 469 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 GRPP07492 148 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 RARBP10826 455 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 MTHFD1P11586 935 aaKnown RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 VIPR1P32241 457 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 PLCD1P51178 756 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 COPAP53621 1224 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 CEBPZQ03701 1054 aaKnown RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 SP140Q13342 867 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 TMTC3Q6ZXV5 915 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 MAPKAPK5Q8IW41 473 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 CCDC117Q8IWD4 279 aaPredicted RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 TEX11Q8IYF3 940 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 LINC00301Q8NCQ3 95 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 AFG1LQ8WV93 481 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 HERVK_113Q902F9 699 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 HTRA1Q92743 480 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 ZNF622Q969S3 477 aaKnown RBP eCLIP6.9□□□□□ -1.31
SPEN-202ENST00000438066 SPSB4Q96A44 273 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 DYNLL2Q96FJ2 89 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 LIN37Q96GY3 246 aaPredicted RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 EYA3Q99504 573 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 BARD1Q99728 777 aaKnown RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 CENPOQ9BU64 300 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 CLSTN2Q9H4D0 955 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 HEYLQ9NQ87 328 aaPredicted RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 IL17RBQ9NRM6 502 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 TBC1D22BQ9NU19 505 aa6.9□□□□□ -1.31
SPEN-202ENST00000438066 RBM28Q9NW13 759 aaKnown RBP6.9□□□□□ -1.31
SPEN-202ENST00000438066 PLIN4Q96Q06 1357 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 TSPY2A6NKD2 308 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 PLEKHA8P1O95397 391 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 IDEP14735 1019 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 ATF2P15336 505 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 CHRNA5P30532 468 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 CASRP41180 1078 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 PRKAA2P54646 552 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 FKBP1AP62942 108 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms