RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CNTN3Q9P232 1028 aa10.8□□□□□ -0.68
CLSTN1-203ENST00000435891 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
CLSTN1-203ENST00000435891 IKBKGQ9Y6K9 419 aa10.8□□□□□ -0.68
CLSTN1-203ENST00000435891 IQANK1A0A1B0GTG1 560 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ZBED1O96006 694 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ADCYAP1R1P41586 468 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 RBP5P82980 135 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 PRKD1Q15139 912 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 CCDC6Q16204 474 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 FYB2Q5VWT5 728 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ZNF534Q76KX8 674 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 UNC5BQ8IZJ1 945 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 C18orf25Q96B23 403 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SRPK1Q96SB4 655 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 MMADHCQ9H3L0 296 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 DENND2DQ9H6A0 471 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ZC3H7BQ9UGR2 993 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 APOL1O14791 398 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ATP6V1G1O75348 118 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 DLDP09622 509 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 CSH1P0DML2 217 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 CSH2P0DML3 217 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 P4HA1P13674 534 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC9A4Q6AI14 798 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC35F5Q8WV83 523 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 INPP5DQ92835 1189 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ALKBH8Q96BT7 664 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 DCPSQ96C86 337 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 RAB3IPQ96QF0 476 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 C16orf70Q9BSU1 422 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 PIH1D1Q9NWS0 290 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 HMX2A2RU54 273 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC15A5A6NIM6 579 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 TROVE2P10155 538 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SERPINB4P48594 390 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 TTLL12Q14166 644 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SMAD1Q15797 465 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 KIZQ2M2Z5 673 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 MUM1Q2TAK8 710 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 HSF5Q4G112 596 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 FAM47CQ5HY64 1035 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 MARCH8Q5T0T0 291 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 RNF220Q5VTB9 566 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 OPTNQ96CV9 577 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 MPHOSPH6Q99547 160 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 TMEM120AQ9BXJ8 343 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC13A1Q9BZW2 595 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SNTG2Q9NY99 539 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 PAK5Q9P286 719 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC17A6Q9P2U8 582 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 ITGA11Q9UKX5 1188 aa10.79□□□□□ -0.68
CLSTN1-203ENST00000435891 FAM237BA0A1B0GVD1 139 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ATP5HO75947 161 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SDC4P31431 198 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 IREB2P48200 963 aaKnown RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC6A3Q01959 620 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ZNF484Q5JVG2 852 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 MTHFD1LQ6UB35 978 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 UNC5AQ6ZN44 842 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC26A11Q86WA9 606 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 C7orf31Q8N865 590 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 RTP4Q96DX8 246 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 EIF2AQ9BY44 585 aaKnown RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 CADM1Q9BY67 442 aaKnown RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 TRIM55Q9BYV6 548 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SMAPO00193 183 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 RFPL1O75677 317 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 CYP2F1P24903 491 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 BOLA3Q53S33 107 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ZNF618Q5T7W0 954 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 PYROXD2Q8N2H3 581 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 NDRG1Q92597 394 aaKnown RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 GBP5Q96PP8 586 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 NRDE2Q9H7Z3 1164 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 CDHR5Q9HBB8 845 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ARMCX1Q9P291 453 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 CCDC195A0A1B0GUA6 201 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 NPTXRO95502 500 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 CCDC130P13994 396 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 GJA5P36382 358 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ARFIP2P53365 341 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SOWAHAQ2M3V2 549 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 TSNAXIP1Q2TAA8 658 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 DSTYKQ6XUX3 929 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 TMEM110Q86TL2 294 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ALYREFQ86V81 257 aaKnown RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 SKA1Q96BD8 255 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 C20orf27Q9GZN8 174 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 DHX35Q9H5Z1 703 aaKnown RBP10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 MTMR10Q9NXD2 777 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 ZNF232Q9UNY5 417 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
CLSTN1-203ENST00000435891 TRAFD1O14545 582 aaPredicted RBP10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 CXCL11O14625 94 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms